Geobacter sulfurreducens KN400: KN400_1549
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Entry
KN400_1549 CDS
T01940
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma-38 factor, stationary phase
KO
K03086
RNA polymerase primary sigma factor
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KN400_1549 (rpoS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsk03021
]
KN400_1549 (rpoS)
Transcription machinery [BR:
gsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KN400_1549 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Rrf2
DUF7061
Motif
Other DBs
NCBI-ProteinID:
ADI84361
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All DBs
Position
1640915..1641901
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AA seq
328 aa
AA seq
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MSDMNELDEKELDAPDEPGEDFIEPEPTTFELEAAEEEEEPEEPAEVGKNIEQEHFDDAI
KLYLREIQRTRLLTADEEKELAGRIAKGDKAARDKMIESNLRLVVKIAKRYINRGLPFLD
LIEEGNMGLIKAVERFKLSKECRFSTYATWWIRQSIERALVNQSRTIRLPVHVSDDINKM
LKITRELVQRLNREPSVKEVATEMKVNSAYVRRLMVLLKKTYSIERPMGENSDYFLIDTI
EDTSTVSPAVLLEDLNKYEIVSKWFASLSENEQTILTLRFGLEDKEPQTLDTIGRSFGVT
RERIRQIEAKSLEKLRKYIEESDGNAID
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacatgaacgaactggatgagaaagagctggatgctccggatgagcccggcgag
gacttcattgagcccgagccgacgacctttgagctggaggcggccgaggaagaggaagag
cccgaggagcccgctgaggtcggcaagaacatagagcaggagcacttcgacgatgcaatc
aagctctatttgcgcgagattcagcggacgcggctgctgaccgccgatgaggaaaaagag
ctggccggccgtatcgccaagggtgacaaggctgcccgggataagatgatcgagtcgaat
ctgcggctcgtggtcaagattgccaagcggtacatcaatcgggggctcccttttctcgat
ctgatcgaggagggcaacatggggctcatcaaggcggtggagcgcttcaagctctcgaag
gagtgccgtttctccacctacgccacctggtggatccgccaatccatcgagcgcgccctc
gtgaatcagtcgcggacgatcagactgccggtccatgtctccgacgacattaacaagatg
cttaagatcacgcgtgaactggtgcagagactcaaccgcgagccgagcgtgaaagaagtc
gccaccgagatgaaggtgaattccgcctacgtccggcggctgatggtcctcctcaaaaag
acctactccatcgagcgccccatgggggagaacagcgattattttcttatcgacaccatt
gaggatacgtccaccgtctcgccggccgtgctgcttgaggatctcaacaaatacgaaatc
gtgtccaagtggtttgcgtccctgtctgagaacgagcagacgatcctcacgctccgcttt
ggcctggaggacaaggagccccagaccctcgacaccatcggtcgcagcttcggcgtcacc
cgtgagcgtatccggcagatcgaggccaagtctctggaaaaattgagaaagtatattgag
gaaagcgatggcaacgccatcgattga
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