Geobacter sulfurreducens KN400: KN400_1558
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Entry
KN400_1558 CDS
T01940
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KN400_1558 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsk03400
]
KN400_1558 (recC)
Enzymes [BR:
gsk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KN400_1558 (recC)
DNA repair and recombination proteins [BR:
gsk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KN400_1558 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ADI84370
LinkDB
All DBs
Position
1649897..1653091
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AA seq
1064 aa
AA seq
DB search
MPLTIYTSNRMEALVEQLCAVVEPPLSSPFVPETIVVQSRGMERWLAMELAKRLGIWANG
SYPFPNAFVWSLFRAALPHLPDQSPFDPAILTWRIMDLLPRLLPEPAFGQLRGYLAGEDR
ELRLYQLAARIADTFDQYTVFRGDLLATWETGRDQQWQARLWRALTADSPGTHRGAVRDA
FLKQLAGGRLPAGVCPERVSVFGISYLPPFHLEIFTSLARLCPVNLFVLSPCREYWGDIV
SPGARARMTPERRQQAVEGHPLLASLGKPGRDFSSLILACDDLSGGERDLYADAPGETLL
AAVQNGILTLDEADGTPRLVRVDPGDRSIGIHSCHGPMREAEVLHDVLLAMFEDLPGLTP
RDILVMTPDIETYAPYVAAVFGGGQDQRRRIPFSIADRSIRSAGGAADAFLAILDLPLGR
FPATGVLDILETGAVHRRFGIDEAGLEQIRSWVEATRIRWGMDENERRAAGLPAYRENSW
QAGLDRLLLGVAMPDEEGAMFGGILPHDAMEGDGPVLLGRFIRFVEALERVRQDLARPRS
LEGWTATLRGILADFFNPDDATAFERAALGRIVDGLGELGAGSGFTDEVGRSVIRAWLGE
RLDRPDQGLGFMTGGVTFCAMLPMRSIPFRVICLLGVNDDSFPRRDRAAGFDLMAADRRP
GDRSLREEDRYLFLEALLSARERLVISYTGQSVRDNAELPPSVLVSEFLDYLGSRFTDGT
DRFPASLVTRHRLQPFSPAYFTGDGGLFSYAAEECRALSRRGRDDAPRPFLEHPLAESGP
ASADETEILPLAQLISFFEHPVRYLMRHRLGIRLEESRSPLEDREPFALDSLDAFLLEQE
ILDHILAGGDPADLLPVARARGGLPPARQGELAFAGLTARVRDLADRVRPATNGQPPLEP
LTVDLRVGERRLVGELGSLWPAGLIRWRCARLSGRDHIRLWIEHLVFNALALPATGAASR
LLAADGDLALRPVADPLAHLEALVSYYGQGSREPLRFFPRSSLAFARTGEMAAARTTWGG
DFYPEGDDPYYALCFGTADPLDDAFRETSVAILTPLLAHREDER
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
ttgcccctgaccatctacacgagcaaccggatggaggccctggtcgagcagctttgcgcc
gtggtcgagccccccctgtcgtcaccctttgttcccgagaccatcgtggtgcagagccgg
ggcatggaacggtggctcgccatggagctggcaaagcgcctggggatctgggcgaacggc
tcctatccctttcccaatgcctttgtctggtcgctcttccgggcggcgctgccccatctg
ccggaccagtccccctttgaccccgccatcctgacttggcggatcatggacctgctgccg
cgcctgctcccggaaccggccttcggccagttgcgggggtatctggccggggaggaccgg
gaactgcggctctaccagcttgcggccaggatcgccgacacctttgaccagtacaccgta
ttccggggcgacctgctggcgacctgggaaacggggcgggaccagcagtggcaggcccgg
ctctggcgcgcattgaccgcggacagccccggtacccaccggggggccgtgcgcgacgca
tttctgaaacagctggccggggggcgtctccctgccggcgtctgccccgaacgggtgtcg
gtcttcggcatctcgtaccttccgccgttccacctggagatcttcacctccctggcccgg
ctctgcccggtgaacctgttcgtcctgagcccctgccgggaatactggggggatatcgtc
tcgcccggcgcccgggcgcggatgaccccggagcgccggcagcaggccgtggaggggcat
ccgctgcttgcctccctgggcaagccggggcgcgatttctcgtccctcatcctggcctgc
gacgacttgtcgggcggcgagcgcgacctctatgccgacgcccccggcgaaacgctcctg
gcagcggtgcagaacggcatccttaccctggacgaggccgacggcactccgcgcctggtc
cgggtggaccccggcgaccgctcgatcgggattcattcctgtcacggccccatgcgcgag
gcggaggtgctccacgacgtcctgctggccatgttcgaggacctgcccggcctcacgccc
cgggatatcctcgtgatgacgccggacatcgagacctatgccccctatgttgccgcggtg
ttcggcggcggtcaggaccagcggcggcgcatcccgttttccattgccgaccggagcatc
aggagtgcggggggagcggccgacgccttcctggccatcctcgatctccccctgggccgc
ttcccggcgaccggtgtgctggacatcctggagaccggcgcggtccaccgccgtttcggc
atcgacgaggccggtctcgaacagatccgctcctgggttgaggccacccgcatccgttgg
ggcatggacgagaacgagcgccgggctgccgggctgcctgcctaccgggagaacagctgg
caggcggggctcgaccggctgctgctgggggtggccatgcccgacgaggaaggggccatg
ttcggcggcatcctcccccacgatgccatggaaggggacgggccggtgctcctggggcgc
ttcatccgcttcgtggaggccctggagcgggtgcggcaggatctggcgcgcccccgctcc
cttgaggggtggacagcgaccctgcgcggcatcctggccgacttcttcaatcccgatgac
gccaccgccttcgaacgtgccgccttgggcaggatcgtggacggcctcggcgaactcggc
gcgggctccggcttcacggacgaggtggggcggtccgtgatcagggcctggctcggcgaa
cggctcgacaggcccgaccaggggctcggcttcatgaccggcggggtcaccttctgcgcc
atgctccccatgcggagcatccctttccgggtgatctgcctgctgggggtgaacgacgac
tccttcccccgccgggaccgcgccgccggcttcgacctgatggccgcagaccgccgtccc
ggcgaccggtccctgcgggaggaggaccgctacctctttctggaagccctcctctcggcc
cgggagcgcctggtgatcagctacaccggtcagagcgtccgggataacgccgagcttccc
ccgtcggtgctggtgagcgagttcctcgactacctgggatcgcgcttcacggacggcacc
gaccggttcccggcctctctggtgacacggcaccggctccagcccttcagccccgcctac
ttcaccggtgacggcgggctgttcagttacgcggccgaagagtgtcgcgccctgtcccgt
cgcggcagggacgacgcaccgcgccccttcctggagcaccccctggccgagtccggtccg
gcgtcggccgacgaaacggagatcctgcccctggcgcagctcatctcctttttcgagcac
ccggtgcgctacctcatgcgtcaccggctcggcatccgcctggaggagagccgctccccc
ctggaggaccgggagccctttgccctggactctctggatgccttcctgctggaacaggag
atcctggaccacattctggcgggcggcgacccggccgacctcctccccgtggcccgggcc
cggggcggcctgcccccggcgcgccagggagagctggcctttgcggggctcaccgcccgg
gtgcgggacctggccgaccgggtccggccggcaaccaacggccagccccccctcgaaccc
ctgaccgtggacctgcgggtgggtgagcggcggctcgtgggcgagctgggttccctctgg
cccgccggccttatccgctggcgctgtgccaggctgtccggccgcgaccacatccggctc
tggattgagcacctggttttcaatgccctggcattgcccgccaccggggcggcaagcagg
ctcctggccgctgacggcgacctggcgctccgtcccgtggccgatccccttgcgcacctg
gaggctctggtgtcgtactacgggcaggggagccgggagccgctgcggttcttcccgcgc
agctccctggcctttgcccgcacgggcgagatggcggcggcccgcaccacctggggggga
gacttctacccagagggggacgatccctactatgcgctctgcttcggcactgccgatccc
ctggacgacgccttccgcgagacgtccgtcgcaatcctgacccccctgctggcccaccgg
gaggacgagcggtga
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