Geobacter sulfurreducens KN400: KN400_1629
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Entry
KN400_1629 CDS
T01940
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk00260
Glycine, serine and threonine metabolism
gsk00630
Glyoxylate and dicarboxylate metabolism
gsk00670
One carbon pool by folate
gsk00680
Methane metabolism
gsk01100
Metabolic pathways
gsk01110
Biosynthesis of secondary metabolites
gsk01120
Microbial metabolism in diverse environments
gsk01200
Carbon metabolism
gsk01230
Biosynthesis of amino acids
gsk01240
Biosynthesis of cofactors
gsk04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
KN400_1629 (glyA)
09102 Energy metabolism
00680 Methane metabolism
KN400_1629 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KN400_1629 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
KN400_1629 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
KN400_1629 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
KN400_1629 (glyA)
Enzymes [BR:
gsk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
KN400_1629 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ADI84441
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Position
1727518..1728765
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AA seq
415 aa
AA seq
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MSILETFDPQVAEAIRHETERQEYNLELIASENFVSEAVLEAQGSVMTNKYAEGYPGKRY
YGGCHHVDVVENLAIERAKELFGADHANVQPHSGSQANMAVYFSVLKPGDTILGMNLSHG
GHLTHGSPVNFSGRFFNVVPYGVSQETETIDFNEVERLALEHKPKMIVVGASAYPRTIDF
AAFRIIADKVGAVIMVDMAHIAGLVAAGLHPSPVPYAEFVTTTTHKTLRGPRGGMILCRE
EYAKTLNSNIFPGIQGGPLMHVIAAKAVALKEALQPEFKAYQAQIVKNAKALADELVKRG
FRLVSGGTDNHLMLVNLTGTELTGKVAEESLDKAGITVNKNTVPFETRSPFVTSGFRIGT
PAATTHGLKEAEMADVAGFIAEALANVDNDAKLAEIKGRVNVLMKRFPLYAHRLS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattctcgaaacctttgacccgcaggtagctgaggcgatccgccatgaaaccgaa
cggcaggagtacaacctggagttgatcgcttccgaaaactttgtttccgaggcggtactg
gaagcccagggctcggtgatgaccaataagtatgccgagggataccccggtaagcgctac
tatggtggatgccaccatgtggacgtggtggaaaatctcgctattgagcgggccaaggag
cttttcggtgccgatcatgccaacgtccagccccattcgggctcccaggcaaatatggcg
gtctatttttcggtgctcaagcccggcgacaccattcttgggatgaatctgtcccacggc
ggccacctgacccacggcagccccgtgaacttctccggccgtttcttcaacgtggttccc
tacggcgtgtcccaggagaccgaaacgatcgacttcaatgaggtggagcgtcttgccctt
gagcataagccgaagatgatagttgtgggggcaagcgcctatccccgaaccatcgatttt
gccgccttccgcatcattgccgataaggtcggcgcggttatcatggttgatatggctcac
attgcgggcctggttgcggccggtctccatccgagccctgttccctacgctgaattcgtg
accaccactacccataagaccctcagaggtccccgcggcgggatgatcctgtgccgtgag
gagtacgccaagacgctcaattccaacatcttccccggtatccagggggggccgctcatg
catgtcatcgcggccaaggccgttgccctcaaggaggccctccagcccgagttcaaagcg
tatcaggcccagatcgtgaaaaatgccaaggcccttgccgacgagctggtaaagcgcggg
ttccggcttgtgtccggcggcaccgataaccatctgatgctggttaacctaaccggcacc
gaactgaccggcaaggtggcggaagagtctctggataaggccggcatcacggtgaacaag
aacacggtgcctttcgagacccgttcaccctttgtcacctccggtttccggatcggcact
cccgcagccactacccacggtctcaaggaagctgaaatggccgacgtggcgggctttatc
gcagaggccctggccaacgtggacaatgatgccaaactcgccgagattaaggggagggtc
aatgtgcttatgaaacgcttccccctctatgctcaccgtctttcataa
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