Geobacter sulfurreducens KN400: KN400_1913
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Entry
KN400_1913 CDS
T01940
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk02020
Two-component system
gsk02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KN400_1913 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KN400_1913 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsk03021
]
KN400_1913 (rpoN)
Transcription machinery [BR:
gsk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KN400_1913 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Sigma70_r4_2
HTH_3
Motif
Other DBs
NCBI-ProteinID:
ADI84725
LinkDB
All DBs
Position
complement(2036511..2037956)
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AA seq
481 aa
AA seq
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MAIEMRQQMKMTQQLVMTPQLQQAIKLLQLSRLELQDLVRQEMEENPLLEESLEAEEVKE
QDLVELSEKEDAPAPAEQDFREVTTGEETRESDWDSYLEGYNYSSGEQYYDDEDRPSYEN
ILTRKGTLADHLMWQLNMAKLSDEEARASAEIIGNIDEDGYLRATVEEVALACSVSESVA
ESALKKIQEFDPMGVGARNLRECLLIQVEQLGMAGSVVDGILRNHLHDLETRKYKQIAKS
LGVDVDSILMAAKIIAGLDPKPGRVYGSEDVHYISADIFVYKIADDYVVVLNDEGLPNLR
ISPFYAGEIKNGAAVDAKAEEYINEKSRSAMWLIKSIHQRQRTIYKVAKSIVKFQREFLD
RGIEHLRPLVLRDVAEDIGMHESTISRVTTNKYMQTPQGLFEMKYFFNSGISTTEGDFIA
SESVKNKIKEIVDSEDPRKPYSDQRIAELLSAHTINIARRTVTKYREMLKIGSSSERKRH
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggccattgaaatgcgccaacagatgaagatgacccagcagctggtgatgacaccccag
ttgcagcaggccatcaaacttctccagctgtcacggctggagcttcaggatctggtccgt
caggagatggaagagaatccgcttctggaagagtctctggaggctgaagaggtcaaggaa
caggatctggtcgaactttccgaaaaggaggatgctcccgctccggctgaacaggatttc
cgcgaggtcaccacgggggaagagacccgggagtcggactgggacagctaccttgagggt
tataattacagttccggcgaacagtactacgatgatgaagatcgtccatcctacgaaaac
attctgacccgcaaagggacccttgccgatcatctcatgtggcagctcaatatggccaag
ttgagcgatgaagaggcacgggccagcgcggagattatcggcaacatagatgaagacggc
tacctgcgcgctacggttgaggaagtcgccctggcatgctccgtaagcgaatccgtggcg
gaatcggctttgaagaagatccaggaatttgaccccatgggggtgggggcccgtaacctg
agggaatgtctcctgatccaggtggagcagctcggcatggcggggagcgttgtggacggc
atcctccgcaatcacctccatgacctggagacccgcaagtacaaacaaattgccaagtct
ctcggggtcgacgtggacagcatcctgatggccgccaagattatcgccggcttggacccg
aaaccgggccgcgtctatggctccgaagatgtccactacatttcggccgatatatttgtc
tataaaatcgctgacgactatgtcgtcgtgcttaatgacgaaggccttcccaatctgaga
atcagccccttttatgccggcgagatcaagaacggtgccgccgtcgacgccaaggccgag
gagtacatcaacgaaaagtcccgctccgccatgtggctcatcaagagcatccaccagcgg
cagagaaccatctacaaggttgcgaagagcattgtgaagttccagcgcgagtttctcgac
cgcgggatagaacaccttcgccccctggtgctcagggacgtagccgaggatatcggcatg
cacgagtcgaccatcagccgcgtcaccaccaacaagtacatgcaaaccccccaggggctc
ttcgagatgaagtactttttcaatagcggcatttcaactaccgaaggagatttcatcgct
tcagagagcgtcaagaacaagatcaaggaaatcgttgattccgaggatccccgaaagccg
tacagcgaccagcgtatcgccgaattgctttcggcgcacaccatcaacatcgcccgacga
accgtaacgaaataccgcgagatgttgaaaatcggctcgtcatccgagcgcaaacgtcat
ttttga
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