Geobacter sulfurreducens KN400: KN400_1920
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Entry
KN400_1920 CDS
T01940
Symbol
kdsA
Name
(GenBank) 3-deoxy-D-manno-octulosonate-8-phosphate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk00541
Biosynthesis of various nucleotide sugars
gsk01100
Metabolic pathways
gsk01250
Biosynthesis of nucleotide sugars
Module
gsk_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KN400_1920 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
gsk01005
]
KN400_1920 (kdsA)
Enzymes [BR:
gsk01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
KN400_1920 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
gsk01005
]
Lipid A
KN400_1920 (kdsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
ADI84732
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Position
complement(2042780..2043598)
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AA seq
272 aa
AA seq
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MTREITIGSVKIGGDRPLVLIAGPCVIENEAATLRCAERLMTICNGVSVSLVFKASYDKA
NRTSVTSFRGPGMQEGLRILQKVKDSLGIPVISDIHSIEQVKPAAEVLDIIQVPAFLCRQ
TDLVVEVGRTNRVVNVKKGQFMAPWDMENVVGKILSTGNERIILTERGVTFGYNNLVSDM
RSLPIMRRIGFPVVFDATHSVQLPGGQGGSSGGQREFVEYLSRAAVATGIDGIFMEVHED
PEKALCDGPNSVKLDDLPALLKKLKAIDAIVK
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgaccagggaaattaccataggttccgtaaagattggtggcgaccgaccgctggtgctc
atcgccggcccctgtgtgatcgaaaatgaggcggcaaccctgcgttgcgccgagcgccta
atgaccatctgcaacggcgtatccgtgtcgcttgtcttcaaggcatcctatgacaaggcg
aatcgcacgtcggttacctcgtttcgcggcccaggcatgcaggaggggttgcgcattctc
cagaaggtgaaagactccctcggcatccctgtcatctcggacatccactcaatcgagcag
gtaaagccggctgccgaggtgctcgacatcattcaggttcccgcgtttctctgccgccag
accgacctggtggtggaagtcggccggaccaatcgggtggttaatgtcaagaagggccag
ttcatggccccatgggacatggagaacgtcgtcggcaagattctgtcaaccggcaatgag
cgtatcatcctgacggagcgcggggtaacattcggctacaacaatctcgtttccgacatg
cggagtcttcccatcatgcgccgcatcggcttcccggtggtcttcgacgccacccacagc
gttcaactgcccggcggccagggcggttcgtccggcggtcagcgcgagtttgtggagtac
ttgtcccgggccgcggtcgccaccggcatcgacggcatcttcatggaagtccacgaagac
cccgaaaaggccctgtgcgacggccccaactcggtgaagctcgatgacctgcccgcactg
ctcaagaagctgaaggcaatagacgccatcgtaaaatag
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