Geobacter sulfurreducens KN400: KN400_2104
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Entry
KN400_2104 CDS
T01940
Name
(GenBank) nucleoside diphosphate-sugar dehydratase, putative
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk00521
Streptomycin biosynthesis
gsk00523
Polyketide sugar unit biosynthesis
gsk00541
Biosynthesis of various nucleotide sugars
gsk01100
Metabolic pathways
gsk01110
Biosynthesis of secondary metabolites
gsk01250
Biosynthesis of nucleotide sugars
Module
gsk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KN400_2104
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KN400_2104
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KN400_2104
Enzymes [BR:
gsk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
KN400_2104
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GFIT
Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
ADI84916
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Position
complement(2258614..2259102)
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AA seq
162 aa
AA seq
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MSVSPEFTRGKIHDVVVKPLGKFLDERGWLAELFRSDETDPATMPVMAYVSMTRPGIARG
PHEHVDQTDWFCFIGPSNFKVYLWDSRPDSPTHGVKQTLFAGIDAPMSVIVPPGVVHAYK
NVGGVDGIVFNAPNRLYAGEGKSSPVDEIRHEDVAGSPFILD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttagtcccgagttcacccgcggcaagatccacgacgtggtggtgaagcccctt
ggcaagttcctggacgagcggggctggctcgccgaactgttccgcagcgacgaaaccgat
cccgcgaccatgccggtcatggcctacgtttccatgacccggccgggcattgcccggggg
cctcacgagcacgtggaccagaccgactggttctgctttatcggtccgtccaatttcaaa
gtctatctctgggactcccggcccgactcgccgacccacggcgtgaagcagaccctgttc
gcggggatcgacgcgccaatgtccgttatcgtgccgccgggcgtcgtccatgcctacaag
aatgtcggcggtgttgacggcattgtcttcaacgcgcccaacaggctgtatgccggagag
ggaaaatcctcaccggtagatgagatccgccacgaggacgtggccgggtcccccttcatc
ctggattga
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