Geobacter sulfurreducens KN400: KN400_2309
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Entry
KN400_2309 CDS
T01940
Symbol
rmlB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk00521
Streptomycin biosynthesis
gsk00523
Polyketide sugar unit biosynthesis
gsk00525
Acarbose and validamycin biosynthesis
gsk00541
Biosynthesis of various nucleotide sugars
gsk01100
Metabolic pathways
gsk01110
Biosynthesis of secondary metabolites
gsk01250
Biosynthesis of nucleotide sugars
Module
gsk_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KN400_2309 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KN400_2309 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
KN400_2309 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KN400_2309 (rmlB)
00525 Acarbose and validamycin biosynthesis
KN400_2309 (rmlB)
Enzymes [BR:
gsk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KN400_2309 (rmlB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ADI85121
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All DBs
Position
complement(2484470..2485546)
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AA seq
358 aa
AA seq
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MGDTFSPSAVLVTGGAGFIGSNFINHFLPANPGCRVINLDILTYAGNLRNLTAVEQNPAY
RFVKGDIGDADLVRRILAEERIDAVVHFAAESHVDRSILGPEIFVRTNVLGTQVLLEESR
RHWESGAIERFRFLHVSTDEVYGTLGETGYFTEETPLAPNSPYSASKAGSDLLVRAYNET
FGLPVLTTRCSNNYGPFQFPEKLIPLMIHNIVAGKPLPVYGDGRNVRDWLHVKDHSTAIE
TVLKGGKPGEVFNVGGNNEWFNIDIVHLLCDLLDERLGRPGGESRGLITFVKDRLGHDRR
YAISAAKIKRELGWEPSYTFERGIAETVDWYLANRAWVDEVTSGSYRDYYETQYGGGQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacaccttttccccttccgccgtgctcgtgaccggcggcgccggcttcatcggc
tccaatttcattaatcacttcctgccggcgaaccccggttgccgggtgatcaatctggat
atcctcacctatgccggcaatctgcgcaatttgacagccgtggagcagaacccggcctac
cgcttcgttaagggcgacatcggcgatgccgacctcgtccggcgcatcctggccgaagag
cggatcgacgcggttgtccactttgccgccgaatcccacgtggaccgctccatcctggga
ccggaaattttcgtgagaaccaacgtcctcggcacccaggtgctcctggaggaaagccgc
cggcactgggaatcgggcgcgatcgagcgcttccgcttcctgcatgtttcgaccgacgag
gtgtacgggacactgggggaaacgggctacttcaccgaggagacccccctggcccccaac
tccccctactcggcgagcaaggccggttccgacctgctggtgcgggcctacaacgagacg
ttcggcctgccggtcctgaccacccgctgctccaacaactacggtcccttccagtttccg
gagaaactgatcccgctcatgatccacaatatcgtggccggaaagcccctgccggtgtac
ggcgacggccgcaacgtgcgcgactggctccatgtgaaggatcattccacggccatcgaa
acggtgctcaagggtggcaagccgggcgaggtcttcaacgtgggcggcaacaacgagtgg
ttcaacatcgacatcgttcacctgctctgcgatctcctggatgaacggctcggcagaccc
ggcggggaaagccgcggcctgatcacctttgtcaaggatcgtctcggccatgatcgccgc
tacgccatcagcgctgccaaaatcaagcgggagctgggatgggagccctcgtacaccttc
gagcgcggcattgccgaaaccgtggactggtacctggccaaccgcgcctgggtggatgaa
gtgacgtccggctcataccgggattactacgaaacacagtacggaggcgggcaatga
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