KEGG   Geobacter sulfurreducens KN400: KN400_2535
Entry
KN400_2535        CDS       T01940                                 
Symbol
lpdA-2
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
gsk  Geobacter sulfurreducens KN400
Pathway
gsk00010  Glycolysis / Gluconeogenesis
gsk00020  Citrate cycle (TCA cycle)
gsk00260  Glycine, serine and threonine metabolism
gsk00280  Valine, leucine and isoleucine degradation
gsk00310  Lysine degradation
gsk00380  Tryptophan metabolism
gsk00620  Pyruvate metabolism
gsk00630  Glyoxylate and dicarboxylate metabolism
gsk00640  Propanoate metabolism
gsk00670  One carbon pool by folate
gsk00785  Lipoic acid metabolism
gsk01100  Metabolic pathways
gsk01110  Biosynthesis of secondary metabolites
gsk01120  Microbial metabolism in diverse environments
gsk01200  Carbon metabolism
gsk01210  2-Oxocarboxylic acid metabolism
gsk01240  Biosynthesis of cofactors
Module
gsk_M00009  Citrate cycle (TCA cycle, Krebs cycle)
gsk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
gsk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
gsk_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:gsk00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    KN400_2535 (lpdA-2)
   00020 Citrate cycle (TCA cycle)
    KN400_2535 (lpdA-2)
   00620 Pyruvate metabolism
    KN400_2535 (lpdA-2)
   00630 Glyoxylate and dicarboxylate metabolism
    KN400_2535 (lpdA-2)
   00640 Propanoate metabolism
    KN400_2535 (lpdA-2)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    KN400_2535 (lpdA-2)
   00280 Valine, leucine and isoleucine degradation
    KN400_2535 (lpdA-2)
   00310 Lysine degradation
    KN400_2535 (lpdA-2)
   00380 Tryptophan metabolism
    KN400_2535 (lpdA-2)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    KN400_2535 (lpdA-2)
   00670 One carbon pool by folate
    KN400_2535 (lpdA-2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gsk04147]
    KN400_2535 (lpdA-2)
Enzymes [BR:gsk01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     KN400_2535 (lpdA-2)
Exosome [BR:gsk04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   KN400_2535 (lpdA-2)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_oxidored FAD_binding_3 FAD_binding_2 NAD_binding_8 GIDA DAO Thi4 AlaDh_PNT_C 3HCDH_N Lys_Orn_oxgnase Lycopene_cycl
Other DBs
NCBI-ProteinID: ADI85347
LinkDB
Position
2749829..2751187
AA seq 452 aa
MQTFDVVVIGGGPGGMTAGMMLKQAGKSVAIIQENHDSFGGVCLNRGCMPTKSMLKAAKV
YRDAQNSEKYGLDLSVNPVDLTRLRAVADADLNMLRHMVQGKLTDARIAVFRGKGSFLSE
HELQICQADGSSEQIRGEKIIIATGSVPAELPCAPFDGHSILSSDQILKNTELPHKLLII
GGGAIGCEFATLYNTFGSRVTLVEAMDSLLPREDREAGKTLQSTFEQQGITVKTGAAIKS
ISVEAGTVHVHYDGSSATEKFDKVLVGIGRTANIAGLNLDAAGVATEQGAVKVNEMMQTT
VPHIYALGDVIGGMTLAHAAEKEGYLLAQNLIQGTRHPLDHRAVPRVVFCHPEVAAVGTH
EARAGIKAFTMPQAPNGRAVVDKVAPAFVKLFIEEDTSQIAGAIIIGEGATEMIHEMAVA
VENRLSLEQIGKTVHAHPTHSKNVLLAVQHFN
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgcaaacgtttgatgttgttgttatcggcggcggtcccggaggcatgaccgcagggatg
atgctgaagcaggccggcaaatcggtcgcgatcatccaggaaaatcacgacagtttcggc
ggggtctgcctcaaccgtggctgcatgccgaccaaatccatgctaaaagcggccaaggtc
tatcgcgatgcccaaaacagcgagaaatacggcctggacctatccgtgaaccctgtcgat
ttaacacgcctgcgcgccgttgccgacgcagatctgaacatgctgcgtcatatggtccag
ggaaaactgaccgatgcgcgcattgccgtcttccgcggcaaaggctctttcctgtccgaa
catgagctacagatctgccaagcagatggcagttccgaacaaatccgcggcgaaaaaatc
atcattgcgaccggttcggtccccgccgaacttccctgcgccccctttgatgggcactcc
atcctctccagtgaccagattctgaaaaacacggagctcccgcacaagctgctgattatc
ggcggcggggcgataggctgcgagtttgcaaccctgtacaacaccttcggcagcagagtt
accttggttgaagccatggatagcctgctaccacgggaagacagggaagccgggaaaacg
ctgcagtccacctttgaacagcagggcatcacggtgaaaacaggcgcagccatcaaaagc
atttcagtggaggctggaacggtccatgtccattatgacggctccagcgcaaccgaaaaa
ttcgacaaggtactggtcggcatcggccgcacagcgaacattgccgggctgaaccttgac
gctgccggagtagcgaccgaacagggcgctgtcaaggttaacgagatgatgcagaccacc
gttccccacatctacgcgctgggcgacgtgatcggtggcatgaccctggcccatgcggca
gaaaaagaagggtacctgcttgcccagaatcttatccagggcactcgccaccccctcgac
catcgtgctgtcccgcgagttgtgttctgtcaccccgaagtggcggcagtaggaacacat
gaagccagggccggcattaaggccttcaccatgccacaggcccccaatggccgcgccgtg
gtggacaaggtcgcgccggccttcgtgaagctgtttatcgaggaggatacctctcaaatc
gccggggcaatcatcatcggagaaggggcaacagaaatgatccacgagatggcagtggcg
gtcgaaaaccgtctgtccctggagcagatagggaaaacggtccatgcccatccgactcat
tccaagaatgttctgctagccgtccagcacttcaattaa

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