Geobacter sulfurreducens KN400: KN400_3356
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Entry
KN400_3356 CDS
T01940
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gsk
Geobacter sulfurreducens KN400
Pathway
gsk03420
Nucleotide excision repair
gsk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KN400_3356 (pcrA)
03430 Mismatch repair
KN400_3356 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsk03400
]
KN400_3356 (pcrA)
Enzymes [BR:
gsk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KN400_3356 (pcrA)
DNA repair and recombination proteins [BR:
gsk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KN400_3356 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KN400_3356 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Zn_ribbon_Dof
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADI86168
LinkDB
All DBs
Position
complement(3652249..3654468)
Genome browser
AA seq
739 aa
AA seq
DB search
MKLLDNLNPPQRAAVLHGEGPLLVLAGAGSGKTRVIVHRIAHLIRERGVPARQILAVTFT
NKAAGEMRERVEKLVGGEVPLIATFHSTCARILRREIHHLGYDSSFAIYDDKDSGKLLKE
VMAGLGLDEKRFPATSLASAIDDCKNRGLAPEDLPADTFTGEVVGRVYAAYQERLKKCNA
LDFGDLIMLTVRLFEEHPVVLERYRDQWRWILVDEYQDTNPIQYRLVRLLAGEHRNLCVV
GDDDQSIYRWRGADIRNILDFEKDFPGVTTIKLEQNYRSTRNILAAAGAVVARNRGRKAK
TLWSENPPGDPIVYRRLADERDEARFVCREIERYVRRGGDLRDVAVFYRTNAQSRVVEDA
LVADGIPYHMVGGMRFYERMEVKDVLAYLRVLANPADEVSLKRIINVPARGIGPGTVDKI
SELAVRRGITILDALGEAATGGLLSSAPRGKVAAFAAVMERFFALRDQLPLAELTTRIIE
ESGYADRLRQERTDEAADRLANLQELVAAMEEFERTSDERGLAPFLEQVALVSDLERSGT
GRESATLMTLHAAKGLEFPMVFMIGMEEKLFPHVRSLDDPEAMEEERRLCYVGMTRARER
LCLTNARRRRIFGQDQVNMPSRFIADIPRNLLDLEDEWQQPALGSVAPDTAGRGREPARH
NLASILETEIEPDFADVEIVPVEPEESGVWLGMKVRHGKFGVGTIRKIEGQGDEQKVIVW
FNSVGPKKLLVRFAGLERV
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgctcgataatcttaaccctccccagcgggccgcggttcttcacggcgaagga
ccgctcctggtcctggccggtgccggttccggcaagaccagggtcatcgtccaccggatc
gctcacctgatccgcgagcggggtgtccccgcccggcagattcttgccgtgaccttcacc
aacaaggccgccggcgagatgcgcgaacgggtggaaaagctcgtggggggtgaggttccc
ctgatcgccacctttcactccacctgcgcgcggatccttcgccgggagattcaccacctg
ggctacgattcctcttttgccatctatgatgacaaggactccggcaagctcctcaaggaa
gtgatggccggtctcggtctcgacgagaagcgtttccctgcgacctcgcttgcctcggcc
atcgacgactgcaagaaccgggggcttgcgccggaggacctgccagccgacaccttcacc
ggcgaggtggtgggccgcgtctacgccgcctaccaggagcggttgaagaagtgcaacgcc
ctcgacttcggcgacctcatcatgctgaccgtccgcctcttcgaggagcaccccgtggtg
cttgagcgctaccgggaccagtggcgctggatcctggtggacgaataccaggataccaac
ccgatccagtaccggctcgtgcgcctattggccggtgagcaccgcaacctctgcgtggtg
ggtgacgatgaccaatccatctatcgctggcgcggggccgacatccgtaacatcctcgac
ttcgagaaggacttccccggcgtcaccaccatcaagctcgagcagaactaccgctccacc
cggaacatccttgcggcggcgggagccgtggtggcacgcaaccggggtcgcaaggccaag
accctctggagcgagaacccgccgggcgaccctatcgtttaccgccgtctggccgacgag
cgggatgaggcccgcttcgtctgccgtgagatcgagcgctacgtacgccgtggcggcgac
ctccgggacgtggcggtcttctaccgcaccaatgcccagtcccgggtggtggaagacgct
ctggtggccgacggcatcccctaccacatggtgggcggcatgcggttctatgagcgtatg
gaggtaaaagacgtccttgcctatctgcgggtcctggcgaacccggctgacgaggtttcg
ctcaagcggatcatcaacgttcccgctcgggggatcggtcccggcaccgtggacaagatt
tccgagctggccgtccgccgggggatcaccatcctcgacgccctgggtgaggcggccacg
ggcggactcctctcctcggcaccccggggtaaggtggctgcctttgcagcagtcatggag
aggtttttcgccctgcgcgatcaactccccctggcagaactcaccacccgcatcatcgaa
gagtcaggctacgcggaccggcttcggcaggagcggaccgacgaggccgcggaccggctc
gccaaccttcaggaactcgtggctgccatggaagagttcgagcggaccagcgatgagcgg
ggacttgctccgttcctggaacaggtggccctcgtctcggatctggagcgtagcggcacg
ggccgcgagtcggcaacgcttatgaccctgcacgcggcaaaggggctcgagtttcccatg
gttttcatgatcggcatggaggagaagctctttccccatgtccgctccctggacgacccc
gaggccatggaggaggagcgccggctctgctacgtggggatgacccgggcacgggagcgg
ctctgcctcaccaatgcccggcgccggcggatcttcggccaggaccaggtgaacatgccc
tcccgcttcatcgccgacatcccccggaacctcctggacctggaggatgaatggcagcaa
cccgccctcggctccgtcgcgcccgacaccgccgggcgggggcgggagcccgcgcgtcac
aacctggcctccatcctcgaaaccgagatcgagccggatttcgccgacgtggagatcgtc
cccgtcgaacccgaagaaagcggcgtctggctcggcatgaaggtacggcacggaaagttc
ggtgtcggcaccatccggaagattgaagggcagggggatgagcagaaggtgatcgtctgg
ttcaactcggtggggccgaagaagcttctggtccgctttgccggtctggagagggtctag
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