Geobacter sulfurreducens KN400: KN400_3408
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Entry
KN400_3408 CDS
T01940
Symbol
gidA
Name
(GenBank) tRNA (5-carboxymethylaminomethyl-U34)-formylglycinetransferase/reductase
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
gsk
Geobacter sulfurreducens KN400
Brite
KEGG Orthology (KO) [BR:
gsk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsk03016
]
KN400_3408 (gidA)
03036 Chromosome and associated proteins [BR:
gsk03036
]
KN400_3408 (gidA)
Transfer RNA biogenesis [BR:
gsk03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
KN400_3408 (gidA)
Prokaryotic type
KN400_3408 (gidA)
Chromosome and associated proteins [BR:
gsk03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
KN400_3408 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
ThiF
Pyr_redox
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
ADI86218
LinkDB
All DBs
Position
complement(3708174..3710057)
Genome browser
AA seq
627 aa
AA seq
DB search
MNLIDYEKQYDVIVAGAGHAGCEAALAAARMGCETLLLTINLDAIALMSCNPAIGGLAKG
HLVKEIDALGGEMGKNIDATGIQYRILNTRKGPAVRASRAQADKQLYRLRMKHVMEEQEH
LSLKQGEVTGLVVEDGRVRGVVTKVGVRFLGKTVILTTGTFMRGLIHVGLTNYPGGRAGD
LPSVGLSDQLRDLGFTVGRLKTGTPARLDGNTIDFSRLEPQYGDDPPVPFSFSTERIDRP
QLPCYIAYTNERTHEIIRSGLDRSPLYSGVIEGVGPRYCPSIEDKVMRFPDKDRHQSFLE
PEGRDTVEYYPSGLSTSLPIDIQYRLYRSIEGLENVEIMRPAYAIEYDYVDPIQLHTSLE
TKLIRNLYHAGQINGTSGYEEAAGQGLMAGINAALRVQGEEPLVLGRDEAYIGVMIDDLV
TLGTREPYRMFTSRAEYRLLLREDNADLRLRERGHAVGLVRDEEYRLFLEKRERIGAELE
RLRTAKLLPSEADPSFLETYGMTDLRNALTFEQLLRRPDITYEELSQIDPVAGMVPPSVK
EQVEIQIKYQGYIERQLDQVARARKLEGTRIPDDLDYTVIPGLSAEVREKLLRFLPDTLG
QASRIQGVTPAAVGILSVAIKSRSASS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcattgattacgaaaagcagtacgacgtcatcgtggcgggagccggccatgcg
ggctgcgaggcggccctggccgcggcgcggatgggatgcgagaccctgcttctcaccatc
aacctggatgccatcgccctcatgtcgtgcaatccggccatcggcggactcgccaagggg
cacttggtgaaggagatcgatgcgctgggcggcgagatgggaaagaacatcgatgccacc
ggcatccagtaccgcattctcaatacccgcaaggggcctgcggtacgggcctcccgcgcc
caggctgacaagcagctctatcgcctccggatgaagcacgtaatggaggaacaggaacat
ctctcgctcaagcagggtgaggtcacgggcctcgtggttgaagatggtcgggtgcgggga
gtggtgaccaaggtcggggttcgctttctgggtaaaacggttattctcaccaccgggacc
ttcatgcgcggactgatccacgtgggtctcaccaactacccgggcggcagggcgggagac
ctgccttcggtggggctgtctgaccagttgcgcgatctcggcttcacggtcggccgcctc
aagacgggaaccccggcgcgcctggacgggaacaccatcgatttttcccggttggaaccc
cagtacggagatgatccgccagtgccgttttccttttctaccgaacggatcgatcggccc
cagcttccctgctacattgcttacaccaacgaacgtacccacgaaatcatccggagcggt
cttgaccgttcacctctctattcgggcgttattgaaggggttggtccccggtattgcccg
tccatcgaggacaaggtcatgcggttcccggacaaggaccgccaccagagttttcttgag
ccagaggggcgcgatacggtggaatactatccgtcgggcctctccacctctcttcccatc
gatatccagtatcgcctctaccgctccatcgaggggctggaaaacgttgagatcatgcgg
ccggcctacgccatcgagtacgactacgtggatccgattcaactccatacgtcacttgaa
acaaagctcatccgcaacctctatcacgccggccagatcaacggcacatccggctacgag
gaggcggcggggcaggggctcatggcgggcatcaacgcggcgttgcgagtgcagggtgag
gagcccctggtgctcggccgcgacgaggcctacatcggggtcatgatcgacgatctggta
acgttggggacccgcgaaccctaccggatgttcacgtcgcgggccgaataccggttgctg
ctgcgggaggacaacgccgacctgcgccttcgggaacgtggccacgctgttggtctcgtt
cgggacgaggagtaccggctgttcctggaaaaacgtgagcggatcggtgcggagctggaa
cggttgcgcaccgcgaaactcctgccgtccgaggcggatccgtcgttcctcgaaacctac
ggcatgaccgatctgcgcaatgctttgacgtttgagcagctcttgcggcggcccgacatc
acctatgaagagctttcgcagattgacccggttgcgggtatggttccgccgtcggtgaag
gaacaggtggagatccagatcaaatatcagggctacatcgagcggcagctggaccaggtg
gcgcgggcgcgcaagctggaagggacccgtatccccgacgacctggactacaccgtcatc
cccggtctctccgccgaggtgagggaaaagctccttcgctttctccccgataccttgggg
caggcctcacgcatccagggggtcacccctgccgccgtcggtatcctttccgtggccatc
aaatccaggagcgcgtcgtcgtga
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