Galdieria sulphuraria: Gasu_00510
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Entry
Gasu_00510 CDS
T02926
Name
(RefSeq) U3 snoRNP component Utp15p-like protein
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Gasu_00510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_00510
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Gasu_00510
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UTP15_C
WD40_Prp19
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
WDR54
Beta-prop_TEP1_C
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
17091241
NCBI-ProteinID:
XP_005709201
UniProt:
M2W9U5
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MAQPFAPVNRKSFPAVPLRTTKDARYWKSFKVSSEILQPATVTDVEFCPATSNTLISTSG
TQISVISVERGQIMNRITSFKEHVYGGSFRKDSALIAAGGEEAIVRVFDAKKRNLLRSFS
GHNGAVHSTKFSHDGIRVMSGGDDHVVRCWDLPTESCLFELVHHRDFVRSQACCPSPHLW
ATGSYDKKMRLFDLRSKEVIFELNHDSLIEDILVFPSGTLAVSVGGNSVRVWDLFTGGRM
LANLQNHSRAAMCASLDGSGSRLITGGLDQQVKVYNTSSFEMVASVWIEGEVVSISLSQD
EHFLACGLSNGKLILKRHSPVSSLRDGEVEEHGRDTYQVVSASTIGTKRTDAVPGTLRYF
FRGQNQKARPEDAAVPKPPKIKLRKHDKMLQSFRYSDALDAAMETGQTAFSCAVIEELVS
RNGLKTALSGRDEESLLPVLQLLTKNMQNPYYSHTLIGLTKVVLSIYEQVLISSNRLRPF
LEKLLSQVKEEIQIQREMKRTIGQTKAILSTCEKVGHKQ
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccctttgcaccagttaacagaaagtctttcccagcagttccgctccgaacg
acaaaagacgccagatattggaagtctttcaaggtctcgagtgaaatacttcaacctgcc
acggttaccgacgttgagttttgtccagcaacttcgaatacgcttatttccacctcagga
actcaaatatctgttatttctgttgaaaggggtcaaattatgaatcgaattacttctttc
aaagagcatgtttatggcggaagttttaggaaggatagtgcacttatagctgcaggtgga
gaggaagccatcgttcgtgtttttgacgcaaagaaaagaaaccttttacgaagtttttct
ggtcacaatggtgctgttcactccacaaaattctcccacgatggtattcgtgtgatgtcg
ggtggcgacgatcatgttgttcgctgttgggatctcccgacagaaagttgtttatttgaa
cttgtccatcatagagactttgtacgttctcaggcttgttgtccttcgcctcacctatgg
gccaccggctcttatgataaaaagatgcgattgtttgatcttcgatcgaaagaagttata
ttcgaattgaatcatgatagtcttattgaagatattttagtttttcctagtggtactttg
gctgtatcagtcggaggaaacagtgtacgagtgtgggatctattcaccggtgggagaatg
cttgcgaatcttcaaaatcattctagagcagctatgtgtgcatcacttgatggctcgggt
tctaggctcattacaggtggcttggatcaacaagtaaaggtttataatacttcatccttt
gaaatggttgcttctgtatggattgaaggagaagttgtatctatttcgttgagtcaagac
gagcattttttggcttgtggtttatccaatgggaaattgattttgaagcgacattcacct
gttagtagtttaagagatggagaagtggaagaacatggaagagatacatatcaagttgta
agtgcgtcaactattgggacaaagaggacagatgcagttcctggaacacttcgttatttt
tttaggggacaaaatcaaaaagctcgccctgaagacgctgctgttccaaaacctccaaag
ataaagttgagaaaacatgataaaatgcttcagtcgtttcgatatagcgatgctcttgat
gcagctatggaaacaggccaaactgcattttcttgtgctgttattgaagaacttgtttca
agaaatggattgaagacagcgttgtctggaagagacgaagaaagtttgcttccagtatta
cagcttcttacgaagaatatgcaaaatccttattattcgcacactttgataggtcttaca
aaggttgtattaagtatttatgagcaagttttgataagttcgaatcgtttgaggcctttt
ttagagaagcttttgagccaagtgaaagaagaaattcagatacaaagggaaatgaagcgc
acaattggacaaacaaaagccatcctttctacttgtgaaaaggttggtcataagcagtga
DBGET
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