KEGG   Galdieria sulphuraria: Gasu_00680
Entry
Gasu_00680        CDS       T02926                                 
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03013  Nucleocytoplasmic transport
gsl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Gasu_00680
  09122 Translation
   03013 Nucleocytoplasmic transport
    Gasu_00680
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsl03019]
    Gasu_00680
   03041 Spliceosome [BR:gsl03041]
    Gasu_00680
Messenger RNA biogenesis [BR:gsl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     Gasu_00680
Spliceosome [BR:gsl03041]
 Complex C
  Other components
   EJC/TREX
    Gasu_00680
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    Gasu_00680
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 17091258
NCBI-ProteinID: XP_005709221
UniProt: M2W9W5
LinkDB
Position
Unknown
AA seq 1437 aa
MESLESNGLLSSSTQWTRRAIRTNTRLFYTQEKFNLLREETEGFAKLITDLLGSHRSRDS
TTKQHTRLVSLVGCFDLDPNRVVDLIWNASAYCNEKCGELLSLMSTFRSDYISQILGFKF
QNCQWNRKSLCTETEESVNFDSTFSPILAENSTVPYSELGPLIEVAAEALSRQLIRLCDI
WPHLSPEDSVIFTRLIEFANEVDKTTAEFGVVSLSGGESSLGSRVSRTEQPFKTYEDFEQ
GPFSEGLFSKIELICALLERGSWNIVVDCMKILSDSGQKNLSDFGQQLCSHPRYRTVLVA
IAEQVLEKFLGKTLNLSLSCPSSANNYFLKMKEEKLLMLFGFQGFEDLLHKEVKGAEQKH
HALVYILLSLGPYIKQSCRCLFLLCRFVQKQLNESDGVRNLGLRLLVEVIFPAMSCIKGN
PALSIELWRTMCLLRFDERYQIYYLVKHSIRQEYSLVRRSNSWTSFETRRVLRRLAKENV
KQFGRWLGKICNGNPLIAAECILEQVQSYENLIPVLIDALKYMTPLTFDIIMYSCLEQLD
TCNKDKIKSDGMNLSQWYYGLCIFISGLIRKYFAFVDCRGLFHFIFNKLEEGDSVYVFLL
LEILSRVSGGGNTEHLSDSQMSSLGGGPLLREIVASALSSSLPETKKVSRKAAEMIKNLV
NSEGLVADLAILVAQQKESILFDSVHREIPLRMICNIFDKCQETLILYTDLILGEDKCSH
IGGDSDDVESRSESHTNGKPDTLNFPSFQSLVVDYHIPYVSAFLFMRPYLVFENIFNMSP
DTSNLSREPFHISCLTKVFPDSMWESISPELFVAFWTLKLYDIHVPKDSYLMELQRLRSM
VYDDQVTENDIHSLVRNVKESRRHRQAGRKLEETLSLLEEEMRVHESHYQRIQSLLCERK
SFFFTQISNAKNWSIVFLQICLIPRCISSFSDAAFCSKFLEVLLDLDPPGLRILPLFHYL
LLNIGEISQCLTEAEATRFGNFVAEVLKILNEWWMNENKYNAECHKRLAFSLEVNEEQGS
GIKYSEFATWNREVHSVMTKSMLSNLDSDNYLDIRNSIEILSRVIKYFPRIESHGLLIQR
KLQEVIENKNETFRVVASRYLSLLQNERGNWISHAEVDPIDSVKLKGDLLDTNFLHSFRH
LYNSEVSTMFSQKSEPTQMTPEEMEEMHIDEQIEKQNTQITVEQDSSSAMPEQSVYDEEL
QVASTHLEDPKTMSILEVNEKMDSSHITDPTHAELARIQAAVAEKRQLLQREREKRNRLP
EQNAKEELSLKNATKETPEPGEITKGSSRSVYKKEPSSSRDSSDDLEARKRRRGLVEEEG
ANASDTNRRNKRERTDAVTSSRNDIMNASRAKDTLSSSRSYSPGSRTYSGAIGDSNRNRN
SRSSYVSQERVFREGESSNRVRRPSVSEQREKKAEDPDNREAYSSTRMSSRSRKSRK
NT seq 4314 nt   +upstreamnt  +downstreamnt
atggaaagtctagagagcaatggacttctctcctcttccactcaatggactagaagagca
atacgcacgaatacaagattgttttatacacaggagaaatttaaccttttacgagaagaa
acggaaggatttgccaaacttattacagaccttttagggtcacatagatctcgggattcg
acaacaaaacaacatacacgccttgtttctttggtgggttgttttgatcttgatcccaat
agagtcgtagaccttatctggaacgctagcgcatactgtaacgaaaaatgtggagaattg
ttatcattaatgtccacatttcgctcagactatatttcgcagattcttggattcaaattt
caaaactgccagtggaacaggaaaagtctgtgtacagagacagaagagtctgttaacttt
gattcaacgttttctcctatattggcagaaaactctactgtaccttattcggagcttggt
cctctcatcgaagtcgcagcggaagctttgagccgtcagttgattcgtctctgtgatatc
tggccacacttatcacctgaagactctgtaattttcactagattgatagaatttgctaac
gaggttgacaaaaccactgcagagtttggtgttgtaagtttatctggaggagaaagcagc
ttaggttcccgagtcagtcgaacggaacagccttttaagacatatgaagactttgagcaa
ggcccattttccgaaggacttttctcgaagattgaactcatttgtgctctattagaacga
ggctcttggaacattgttgttgattgcatgaagatactgtcagattctggtcaaaaaaat
ttatcggactttggacaacaattgtgttcccatcctcgttatcgaactgtcctcgtagcg
attgctgagcaagtcttagaaaaattcctaggcaaaacgctaaacctaagcttgagttgt
ccatcttcagctaataactattttctaaaaatgaaagaagagaagttgttgatgttattc
ggatttcaaggtttcgaggacttgcttcacaaggaagtgaaaggcgcagaacagaaacat
catgcactagtttatatattgctttcacttggtccgtatatcaaacagagttgtcggtgt
ctgttccttttgtgtcgttttgtacaaaagcaacttaacgaaagtgatggagttagaaat
cttgggttaagactcctggtagaagttatatttcccgcaatgagctgtataaaggggaat
cctgcgctttctattgaattgtggagaacgatgtgtcttcttcgctttgatgaacgttac
caaatttattatttggtaaagcattctataagacaggagtacagtcttgtaagaagatcg
aattcctggacaagttttgagacgagaagggttttgcgacgtcttgcgaaagaaaatgtc
aaacaatttgggcgttggttagggaagatttgcaatggaaatccacttatcgctgcggaa
tgtatactggaacaagttcaaagctatgaaaacttgattcccgtcttaattgatgcattg
aagtatatgacaccgttgacttttgatattatcatgtatagctgtcttgagcagttagat
acttgtaacaaggacaaaatcaagtctgacggaatgaatctctctcagtggtattatggt
ctttgtatttttatttctggtcttataagaaagtactttgcattcgttgattgccgaggt
ctatttcattttatctttaataaattggaggaaggagattctgtgtatgtgtttctcctt
ttggaaatcctgagtagagtgagcggaggtggaaatacggagcatttgagtgattcccaa
atgtcttcgttaggcggaggtcctttattacgtgaaattgtagcgtctgctttgtcttcc
tctttgccagagacgaagaaagtatcacgcaaagctgcagagatgataaaaaatttagtc
aattcagaaggacttgttgccgatttggctattttggtagctcaacagaaagaatctata
ttattcgattcagtccatcgagaaattcctctgagaatgatttgcaatatctttgataag
tgtcaagaaactctaatcctttatacggacctgattttgggagaagacaagtgttctcac
ataggtggtgatagtgacgatgtcgaaagtcgctctgaatcccacacaaacggaaagcca
gatacgttgaattttccatcctttcagtctcttgtagtggattaccatataccttatgtt
tctgcgtttctttttatgcgtccgtatcttgtatttgaaaacatctttaatatgtcacca
gatacttctaatttatcaagggaaccgttccatatcagctgcctaacaaaagtatttcca
gacagtatgtgggagtcgataagtcccgaactctttgttgcattttggacacttaaactt
tatgacattcatgttccaaaagattcctatttgatggagttacaaagactacgttctatg
gtgtatgatgatcaagttactgagaatgacatacactccttggttcgtaatgtcaaggaa
agtcgaagacatcgacaagctggcagaaagttagaagagactctttcccttttggaggaa
gaaatgcgggttcatgagagccactatcagcggatacaaagtttgttatgtgaaaggaaa
tccttttttttcacacaaatctcaaatgcaaaaaactggtctatcgtctttttacaaatt
tgtttgatacctcgctgcatctcaagcttcagtgatgcagctttttgctcaaagtttctt
gaggttcttttggatttagatcctcctggtctacggattcttccactttttcattatctg
ctattaaatattggtgagatatcacaatgtttaaccgaggctgaagccacgaggtttggc
aattttgtcgcggaagttttgaaaatactgaatgaatggtggatgaatgaaaacaagtat
aatgcagagtgccataaacggttagcattttccttagaggtaaatgaagaacagggtagt
ggtattaagtattcggagtttgcaacttggaatcgggaggtccattcagttatgaccaag
agcatgttgtccaatttagacagcgacaactatttggacattcgcaattctattgaaatc
ctatctcgtgtgataaaatactttccccggatagaaagtcatggacttctgattcagaga
aagcttcaagaagttattgagaataagaatgaaacttttagggttgtagcctcccgatat
ttgtccttgctacagaatgaacgagggaattggatatcacatgccgaagtagatcctatc
gactccgtgaaattgaagggcgacttgttagataccaatttcctacatagttttcgacat
ttgtacaattctgaagtctcaacaatgttttcgcaaaagtcagagccaactcaaatgact
ccagaagagatggaagaaatgcacatagatgaacaaattgagaaacagaacactcagatt
actgttgagcaagactcctcttccgctatgcctgagcaatctgtgtatgatgaagaattg
caggttgcttctacgcatcttgaagatccgaagacaatgagtattcttgaagtgaacgaa
aaaatggattcatctcatataacggatccaacccatgctgaattagcacgtatccaggca
gcagttgcagagaaacgacagcttttgcaaagagaacgagaaaagagaaaccgtttacca
gaacaaaatgcgaaggaagaactgtctttgaagaacgctacaaaagaaactcctgaacct
ggtgaaataacaaagggcagtagtcgttcagtttacaagaaagaaccatcttcaagtaga
gacagtagtgacgacctggaagctcgcaaaagaagacgtggccttgtcgaggaggaagga
gctaatgcctcagatacaaatagacgtaacaaaagagaacgaacagatgcagttacgtct
tctagaaacgatattatgaatgcctctcgtgcaaaagataccttgagctccagccgttct
tattctccaggttcccgtacctattccggtgctattggagattccaaccggaacagaaat
tcaagatcttcatacgttagccaagaacgcgtgtttcgagagggtgagagttcaaacaga
gttcgtcgtccatctgtttcggaacaacgagaaaagaaagctgaggatcctgacaataga
gaagcatacagttccacccgtatgagtagtcgctcacgcaagagtagaaaataa

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