KEGG   Galdieria sulphuraria: Gasu_02440
Entry
Gasu_02440        CDS       T02926                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit D
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03020  RNA polymerase
gsl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Gasu_02440
  09124 Replication and repair
   03420 Nucleotide excision repair
    Gasu_02440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:gsl03021]
    Gasu_02440
   03400 DNA repair and recombination proteins [BR:gsl03400]
    Gasu_02440
Transcription machinery [BR:gsl03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     Gasu_02440
DNA repair and recombination proteins [BR:gsl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      Gasu_02440
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 17091045
NCBI-ProteinID: XP_005708984
UniProt: M2Y9C8
LinkDB
Position
Unknown
AA seq 150 aa
MLNRSRVPSGLRSVQLVPEQEDAATLQLGEDFSSEKAQPLTISEVAILLSRKRDMMRDLE
GPRAEEFSSVFKKFLEYVERFDRYKGLESATNVRNLLQRYESLDPFEMACLANLCPADAE
EAKTTIPSLKHKIDDSSLNQLLQDLASFTH
NT seq 453 nt   +upstreamnt  +downstreamnt
atgctaaaccgttctcgggtgccctcaggtttgagaagtgtgcagcttgttcctgaacag
gaggatgcggcaactttgcaactcggagaggatttttctagtgaaaaagctcaaccactt
actattagtgaggtggctatactcctttcgcgaaaaagggatatgatgcgggacttggaa
ggccccagagctgaagaattttcaagcgttttcaagaagttcctggaatatgtcgaacgt
tttgaccgatataaaggtcttgagtccgcgacgaacgttcgaaatcttttgcaaagatac
gaaagtcttgatccctttgaaatggcttgtttggcgaatctttgtcctgctgatgcagaa
gaggccaaaactaccataccgagtttaaagcataaaatcgacgattcttcgttgaatcag
ttgttacaagacttggcatcctttactcactga

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