Galdieria sulphuraria: Gasu_03790
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Entry
Gasu_03790 CDS
T02926
Name
(RefSeq) U3 snoRNP component Utp13p-like protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Gasu_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_03790
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Gasu_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_Nup120_160
Beta-prop_EIPR1
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WD40_RFWD3
DUF4221
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR75_2nd
ELYS-bb
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
17091175
NCBI-ProteinID:
XP_005709131
UniProt:
M2W9M9
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MDSQLSKPRPTKLHIRKLFTRRDALQPTYISRGISVSSVYTFEEDSREVLYPTLVTTVTT
QAFLVRWNGNQVLVPVACFAEQNDVISSVCVSHSGSKVAVAYRSSLVALYSVPNEFRRSS
LESRTSLLDQLPVIRQERSWKPIAGNIIVQLAFDFSDTFLVTATTDGKVKIWDVEEGHIT
HSLKTGAAITKTAFHPRVGQLELFLSLDDGRLLVYDLPTRNFSKTFQCNQGAIVSFDFLS
NGNFVVFSVYDNTLHLFRTTDMTAMKHISVDNSITTITALPIMNEQTDFQIFTTSSISGR
LTFWRFSMQEQPKIYKSKELLLSELYGAVESIYVSLSSQVYLFVGMENDMLHVVDTTKME
ITTSVVGNLDEVYDICFLSESKRIAVASNSEDVYIFDGNLDYKSIVLTGHTESVLSLDYD
PLTQVLVTASRDKTCRLYKLNDLDALFESDKLETLGCFAIALGHDGPIGAVSIARTNHTD
SFIVSGAADHTLKLWKFNTNWNGEIRQLSASWTVSAHQKDINCVAISPDFDIIVSTSQDK
TARMWSSRDGKPIATCIGHKRGVWHVSFSPVDRIFATSSGDCTIRIWSARDGACLQLLEG
SSSSLLRVLFLQAGSELASGGSDGLLKIWNVKSGECISTMEAHDDRLWCLTCILDGELIA
SGGADGRILFWKDITLEKEMEEMESKKDWILKQQDLENAMKRKEWQTVFSMSFRVRSAI
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaactatccaagccacggcctactaagcttcacataaggaagttattcacc
cgacgcgatgcgttgcaacctacttatataagtagaggaatttctgtttcttctgtatac
acatttgaagaagatagtcgtgaagttctttatccgactttggtgactactgtaacaact
caagcttttctagttcgctggaatggcaatcaagtccttgttcccgttgcttgttttgct
gaacaaaatgatgtaatttcttctgtttgtgtatctcactcaggttcaaaggttgctgtt
gcatacagaagcagtcttgttgccttatattctgtcccaaatgaattccgcaggtctagt
ttggagtcgagaacttccttgttggaccaactgcctgttattcgacaagaacgttcttgg
aaacctatagctggaaacatcattgtacagctcgcctttgatttcagtgacactttcctc
gtcacggcaaccactgatggaaaagttaagatatgggatgttgaagaagggcatatcact
cacagtttgaaaacaggagcagcaatcacgaagacagcttttcatcctagagttggccaa
ttagagctctttttatctttagatgatggtcgcttattggtttatgatttgcccactcga
aacttttcgaaaacctttcagtgcaatcagggtgctattgtttcttttgattttctttcc
aatgggaactttgtcgtatttagtgtttatgacaatacgcttcatttgtttcggaccact
gatatgacagctatgaaacatatttctgtcgataatagcatcaccacaataactgcacta
cctatcatgaatgagcaaacggatttccagatatttacaacgagtagcatatcaggacgt
ttgaccttttggaggttttctatgcaagagcaacctaaaatttacaagtcaaaggagcta
ctgttgagtgagttgtatggcgcagtagaatccatttatgtttcgctatcatctcaagtt
tatctttttgtgggaatggaaaatgatatgctacatgttgtggataccacaaaaatggaa
attacaacatctgtcgttggaaatttggatgaagtttatgatatctgcttcttatcagaa
agcaaacgaattgctgtagctagcaatagtgaagatgtttatatatttgatggcaatcta
gactataagtcaattgttctcacagggcatacagagagtgttctttctctggactatgat
cctttaacccaagtacttgttactgcttctagagataaaacttgtagattatacaagttg
aacgacttggatgctctttttgagtcggacaaattagaaacattgggatgttttgccatc
gctttaggccatgacggaccgattggggccgtaagtatagctcgtacgaatcacacagat
agtttcattgttagtggtgcagctgatcataccttaaaattgtggaaattcaataccaat
tggaatggcgagataagacaacttagtgctagttggactgtttcagcgcatcaaaaggat
atcaattgtgtggccatatctccagattttgatataattgtgtcaacttctcaagataaa
acagcgagaatgtggtctagtagagacggtaaaccaatagccacttgtataggacacaaa
cgaggagtttggcatgttagtttttctcctgtggatcgtattttcgccacgagttctgga
gactgtacaattcgcatatggagtgctagagatggtgcatgtctacaacttttggaaggt
tcttcaagttctttattacgagtcttgtttcttcaagcagggtcagagttggcttctggg
ggttctgatggcttactgaagatttggaatgtaaaaagtggtgaatgcataagtactatg
gaggctcatgatgatagattatggtgtttgacctgcatcttggatggtgaactcattgcc
agtggaggtgcagatggtagaatactattttggaaggatattacgctggaaaaggaaatg
gaagaaatggaatccaaaaaggattggattttgaaacaacaagacttagaaaacgccatg
aaaagaaaggaatggcagacggtgttttcaatgtcctttagagttagatcagccatctaa
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