KEGG   Galdieria sulphuraria: Gasu_04470
Entry
Gasu_04470        CDS       T02926                                 
Name
(RefSeq) DNA polymerase epsilon subunit 1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03030  DNA replication
gsl03410  Base excision repair
gsl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Gasu_04470
   03410 Base excision repair
    Gasu_04470
   03420 Nucleotide excision repair
    Gasu_04470
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsl03032]
    Gasu_04470
   03400 DNA repair and recombination proteins [BR:gsl03400]
    Gasu_04470
Enzymes [BR:gsl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Gasu_04470
DNA replication proteins [BR:gsl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    Gasu_04470
DNA repair and recombination proteins [BR:gsl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      Gasu_04470
SSDB
Motif
Pfam: POL2_thumb DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 17090944
NCBI-ProteinID: XP_005708875
UniProt: M2X793
LinkDB
Position
Unknown
AA seq 2012 aa
MQSQRKRNILETAASEEEDSSLYQQQVKERRRKQGKFHKLDRDSGFEPLLSLTGSKVGWL
FNAVATTVEDPTNKRVTQAVDLFFIGADGNHFRATMICRPYFYLKVKEGSEEEVEFALKK
YFRDKLYAIKQVALHDQSVPNHVASMTKRSLLAIEFRTMSELNEVSSFVLRRLEEFSTSR
NLLLEETKENEEKLTRSDGFHSILEIFEYDISPISRTMISQNIHVGLWYNVRVDSKSNAV
LHPLSEIVERPQPVVLAFDIETTKAPLKFPDAKTGDQVMMISWMIDGKGYLGVNREIVAA
NIDDFTYSPKDEFPGDFTVFNENDERSLLLRFLDEIQLHTPQIFVTYNGDMFDWPFVFER
ARYYDIDIEKEIGISCNQRETRGRATIHLDCMHWVNRDSYLPQGSRGLKAVTRSLLGYDP
LELDPEEMMPAARSNPQLLASYSVSDAVCTYYLYMRYVHPFIFSLCNIVPLPPEDVLRRG
SGTLCENLLMKEAYQQDILCPNKHQTTLEKYYDGHLLENETYIGGHVEALQAGVFRSDLS
VRFSLSEEVLGDLTRRLDEILQHAMNRLKVDPSKVTNYVQLSSSLTESLKALKHTHAFND
FPVIYHLDVGAMYPNVILTNRLQPHAIVSKHQCASCAFNELEDSQCKRNLKWTWKGEYFP
ATHGETNQIRRDILSNPNGNQVENVRSSEEFRRRLKQYCQKIYKKTLDSYTEEREATVCQ
REHPFYVNTVRAFRDRRYEYKKLLKQWKRKLQDAQGNKDWKSIEEAKKMCVLYESLQLAH
KCILNSFYGYVMRKAARWYSMEMAGVVTQIGANIIRYARSVVDGVGIALELDTDGIWCAL
PKSFPEKIVFQTHDQVTYESSFICEILNYGIFQQFSNPQYQSLVNTERKEFERETVCSIE
FEFDGPYRAMILPASKEEGKSIKKRYAVFHMDGSMAELKGFEMKRRGELKLIKIFQSDLF
QRFLLGETLEECYQKVGEAANNWLEVLETQGASCSEQEIIELLAEQNTMSKSLGEYLKLK
QKSLAITTAKRLAEFLGPQMVRDKGLACKYVIARKPENAQVTERAIPIQIFSAEQSIRES
FLKKWLKETDSEAIQLREFLDWQYYKERLASTIQKIITIPAAFQSVENPVPRVAHPEWLS
AKLRDISCRAKQSMVADFFAKSNENSGFQKESMPDLEDISVVRMLSLSQRTKQIENVSAS
EEMAQNDNLRAEDKPNIQKSFYSWLVYMRNIWRLERRNKVVKRVQKRQHENFESRYDKDV
LPPSRQRQRKDIRRFIAPDPTVASEEFQLQTELHILSIQATETPGEFQIWILPRFPQDTR
TDKPLEKPFSCFISSKRTLYVNCRQPSSRAIGPQIFNVRLPRYRKPCYLYQVEVEESAFL
RQQNELNDLVPLSEVEGIYETQVPLLTNICQRLGNVCKVKDSATFGHMILGDKVDIQQIE
PISSKQEYLGHLSNPEEKAFLYVCLSITKERGLIALTVPYLNKIWLCFISIGQQCPHIEL
HRLLEESCSAAFLQEVETSSWQVESSVFKGYQEALKTLSMQASESLKSSSSLLCILFVQS
SLPPWALSKYFRCTNVTPVSCVDYMWEDSQFPVIGWEVLVVKQFLRRNEHIILQARHLLS
FARISQIPVGNISMKDPYSQCLDMNWAQDLRKNNFILWMSDRAVPDLGGHESEYQLHDLL
ELREPSVEEKEYLLPGLYENICVEFELQNVALCTILSQDILSEMEGSEIPFVTDLFQNFD
KELDSSSNEEAVGYEKILPAFSVLRQTLLRLFSNVNKSFITETLQNHLLRWILKETSLMY
EPLLVSFVQHQMHKVLVILVNSLKQLGAIVPLATYHRMIIATKRSHAMDAMRYCGFLANT
IRENQLFHYLRFAPILFVHRCLILVDSFNYGSIPVVDEIHILRGEALKGYIESERPASRM
QWDLADHFTTDLTLRWNRILEQLLENLHSGSLVCVDSTEEKKNNNNIPLASFVSNLRQEL
YNLVNDSADSYHMNGVPPHPGRLIGSYQPIVL
NT seq 6039 nt   +upstreamnt  +downstreamnt
atgcagtctcaaaggaaacgaaatatactcgaaactgctgcatctgaagaagaagattcg
tctttgtatcaacaacaagtaaaagaaaggcgaagaaagcaaggcaagtttcataagctc
gacagagatagtggatttgagcccttgttatctctaacagggtccaaagttggatggctg
tttaacgcagtagctaccactgttgaggacccaacaaataagagggttacacaggctgta
gacctcttctttatcggtgctgatgggaatcattttcgtgccaccatgatatgtagacca
tatttttacctcaaagtgaaagaaggctctgaggaagaagtagagttcgccttgaaaaag
tattttcgtgataaactctatgctataaagcaagtagctcttcacgatcagtcagttcca
aatcacgttgcaagcatgacaaagagatctttattggctatcgaatttcgaactatgtca
gagctcaatgaagtatcaagcttcgttcttcgtagattggaagagttcagcacaagtagg
aatttgttattggaagaaacgaaagagaatgaagaaaaattaacgagaagcgacggattt
cattctattctcgaaatatttgaatatgatatatctcccatttcaagaactatgattagt
caaaatatacatgttggtctttggtacaatgtccgagtcgactccaaatccaatgcagtt
ttgcatcctctatcagaaatagtagaaaggccacagcccgttgttttggcatttgatatt
gagacaacaaaagctcctctcaaatttcctgatgcaaaaactggtgatcaagttatgatg
atatcttggatgatagatggaaaaggatatctaggtgtgaatagagaaattgttgctgca
aatattgacgatttcacttatagtcctaaagatgagtttccaggagactttacagttttc
aatgaaaatgatgaaaggtcgttattactacgattcctagatgagatacagttacatact
ccacaaatttttgtgacatataacggagatatgtttgactggccatttgtttttgaaaga
gccagatattatgatatcgacatagaaaaggaaataggaatatcatgcaatcaaagggaa
actcgcggtcgcgcaacgattcatttggactgtatgcactgggtgaatcgagattcatat
ctaccacagggttcccgtggtcttaaagcagttactcgatcactacttggttacgatcct
cttgaacttgatccagaagaaatgatgcctgcagcaagaagtaatcctcaactgttagca
tcctattcagtttctgacgcagtttgtacgtattacttgtacatgagatacgtccacccg
tttatattttctctttgtaacattgttccacttccaccagaagacgtcctgcgcagaggt
tctggaaccttgtgcgagaatttactaatgaaagaagcttaccaacaggatattttatgt
cctaataaacatcaaactacattggaaaagtattatgatggtcatcttttagaaaatgaa
acctacatcggagggcacgtggaggcactacaagcaggcgtatttcgaagcgacttatca
gttcggttctcgctttccgaggaagtattgggtgatctcactcgcagactggatgaaata
ttgcagcacgcaatgaatagattgaaagttgatccatccaaggtgaccaattatgttcaa
ctatcatcgtctctaaccgagtctctgaaggctttaaaacatacacatgctttcaatgac
tttccggttatctatcatttagatgtaggtgctatgtatccaaacgttattctgaccaat
cgactgcaacctcatgcaatcgtttccaagcatcagtgtgcatcttgtgctttcaacgag
ttggaagattcacaatgtaaaagaaatttaaagtggacttggaaaggagaatattttcca
gcaactcacggcgaaactaaccagataagaagagacattttatccaatccaaatggcaat
caagtagaaaatgtcagaagttctgaggaattccgcaggcgactaaagcaatattgtcaa
aagatctataaaaagactttggacagctatactgaagaacgagaagctacagtctgtcag
agagaacatcccttttacgttaataccgtaagagcatttcgagatcggcgctatgaatac
aaaaaattattgaaacaatggaaaagaaagctgcaagatgctcaagggaacaaggattgg
aaaagtattgaagaagcgaaaaaaatgtgtgttctatacgaaagtttacaattagctcat
aaatgtatcctcaactcgttctatggttatgtaatgagaaaagctgcgagatggtactcc
atggaaatggctggagttgtaactcaaataggcgcaaacatcattcgctatgctcgcagt
gttgtagatggtgttggaatagctttggagttagatactgatggtatttggtgtgcactt
ccaaagagtttccctgaaaagatagtttttcaaactcatgaccaagtgacatatgagagt
agtttcatatgtgaaatattgaactacggaatattccagcaatttagcaatccccagtat
caatctttggttaacacggaaagaaaagaatttgaaagggagacagtgtgcagtattgaa
tttgaatttgatggtccctatcgagccatgatcttaccagcttcaaaagaggaaggcaag
agcatcaagaaaagatatgctgtgtttcatatggatggaagtatggccgaattgaaagga
tttgaaatgaaaagacgaggagagctgaagctcattaaaatttttcagtcagacttgttt
caacgttttctcttaggggagactttagaggaatgctatcagaaagtaggagaagccgca
aacaattggctcgaagtgcttgaaacgcaaggagcttcttgtagcgaacaagagatcatt
gaactattggcagaacaaaatactatgagcaagtccttgggagaatatctaaaattgaaa
cagaagagccttgctatcactactgcaaagagactagctgagtttttgggtcctcaaatg
gttcgagataagggccttgcttgtaaatatgtgatagctagaaagccagaaaatgcacag
gttaccgaacgtgctattcccattcaaatcttctccgcagaacagtctatccgagaatct
tttctgaaaaaatggctaaaggaaacagatagcgaagctatacaacttcgagaatttttg
gattggcagtattacaaagaaaggttagcatcaactattcaaaagattattacgattcca
gcagcttttcagtccgtcgaaaatcctgtaccaagggttgctcatccagaatggctttca
gcaaaactaagagatatttcatgtcgagcaaaacagtcaatggtcgccgacttcttcgca
aagtcgaatgaaaactctggctttcaaaaagaatccatgccagatttagaggatatttct
gtcgtaagaatgctatcactttcccagagaacgaaacagatagagaatgtatcggcttcg
gaagaaatggctcagaatgataatttgagggcagaagataaaccaaatattcagaaaagc
ttttatagttggcttgtgtacatgcggaacatttggaggctggaaagaagaaacaaggta
gtgaagcgagtacaaaaaagacaacatgaaaacttcgaaagcaggtacgacaaagatgtc
ctacctccatctcgccaacgacagcgcaaagatattcgaagattcatagcacctgatcca
acagtcgcatctgaagagttccaactacagaccgaactgcacattttatctattcaagct
acagaaacacctggagaatttcaaatttggatacttcctcgatttcctcaagatactcga
acagacaagcctctcgaaaagccgttttcttgttttatatcttctaaaagaactttgtat
gtgaactgcagacaaccatcaagtagagctattggaccacaaatattcaatgtgcgtctt
ccaagatatcgaaaaccctgttatttgtatcaagtggaagtagaagaaagcgcttttcta
cgtcagcaaaatgaactgaacgacttggttcctctgtcagaagtggaaggaatatatgaa
actcaagtcccacttcttacaaatatttgtcaacgacttggaaacgtttgcaaggttaaa
gactctgcaacttttgggcacatgattctgggagataaggtagacattcaacagatagag
ccgatatctagcaaacaagaataccttggccacttatccaaccccgaagaaaaggcattt
ttgtacgtatgtttgtcgattaccaaagaaaggggtctgattgctttgaccgttccctat
ttgaacaaaatttggctctgcttcatttcgataggacagcaatgccctcatatcgaactg
catcgactcttagaagaaagttgttctgcggcatttctacaagaggttgagactagtagt
tggcaagttgagtcgtccgtatttaaaggctatcaagaagctctcaaaacgttgtctatg
caagcaagtgaaagtttgaaatcctcttcaagtcttttatgcattttattcgttcaatca
agtcttccgccttgggcattatccaagtactttcgttgtactaatgtcactccagtgagt
tgtgtagattatatgtgggaagacagccagtttccagtgatcggctgggaggtgctagta
gtgaagcaattcttacggagaaacgaacatatcatcttacaagctagacatctactctcg
tttgctaggatttctcagattcctgtcggaaacatctccatgaaagatccttattcacag
tgtcttgatatgaattgggcccaggatttgagaaagaacaactttattttgtggatgtcc
gatagagctgttccggacttgggtggtcatgagtccgaataccagctccatgacctactt
gagcttcgagaaccaagtgttgaagaaaaggagtatctgcttcctggactttatgaaaat
atttgtgttgaattcgagctacagaatgttgctctttgtactattctttcacaggatata
ttatcagaaatggaaggttccgagattccttttgttacagatctttttcaaaattttgat
aaggagctggattcttcttcaaatgaagaagccgttggctacgaaaaaattcttcctgcc
ttctctgtgttacgtcaaacgttgttgagactgttttccaatgtgaacaagagctttata
acagaaacacttcagaatcaccttcttcgctggattcttaaggaaacaagcttaatgtat
gaaccgttgcttgttagttttgttcaacatcaaatgcacaaggtacttgttattttggtc
aattctttgaagcaactgggtgccatcgttccactagcgacgtatcatagaatgattata
gcaaccaaacggagtcatgcaatggatgccatgcgatattgcggtttcttagccaacaca
attcgtgaaaaccagctctttcactatttacgttttgctcccattcttttcgttcatcga
tgtctcattttagttgattccttcaactatggtagtatcccagtggttgatgagatacat
attttgcgaggtgaagcgttaaaaggttatatagagtccgaaaggccagcttctcgaatg
caatgggatttggctgatcattttactacggacttgactttgagatggaatagaattttg
gaacagttattggaaaatttgcacagtggctcacttgtttgtgtggattccaccgaagaa
aagaagaacaacaacaatattccgcttgcttcttttgtttctaatttgagacaagagttg
tacaatttagtaaatgactccgcggattcttatcacatgaatggagtaccacctcatccg
ggtaggctgattggctcttatcaacctattgtattgtaa

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