Galdieria sulphuraria: Gasu_04890
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Entry
Gasu_04890 CDS
T02926
Name
(RefSeq) vacuolar assembly protein Vps41
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
gsl
Galdieria sulphuraria
Pathway
gsl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
Gasu_04890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsl04131
]
Gasu_04890
Membrane trafficking [BR:
gsl04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
Gasu_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
Clathrin
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
17090986
NCBI-ProteinID:
XP_005708922
UniProt:
M2XQA5
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MSLETGEEEEPVFHTSYFLSNTVGIREEQLVNGNKTVVTAITAGTKVIACGTLTGSIYLV
DCSGSVLIKSLECKHSNAVRDLSLSEDNSVVVSVGKGDTTVCISFVFEERNSLQYNYSKS
RLFTGAELSSVAVDPFFGRVSSPQMQRFCFGTTDGELLLHTKSWLGGGSDAVLHHGEGPI
YCIKWQGDLIAWANNRGIRIFDVRFERGVCIVDPPTDWIPNELSWLASNTVSSTLGPREN
KAKKSSSIELPFASLEPRLTWRHLISDTYYSLYVCWYSCCKVISVSSTAEGKSGRRQVRV
LGNISKDELHVRNIVQVAPFGDKAVAMLCVGQPSDQKALFYADKTTVAPIADTFSMELVI
VSLSQNDLSKTRTERKVINNILFSEEPLQKNSLSPSRQGLVHIPGGEPILLAFSTCLPES
LLSGHIEDVYDENSENDASQARTGAVWNVLSLRPFSYIERIEWMLDRERYREAVEIAEMA
PANQLLECGFSIEKLGERFINHLLEKGDYDTLAIVLPRMIHGEDTEFESFTSGIEAHLTA
KRMEKESSEGLYTLESRKRRWEFWIKKLIQIGKLQFVVFAIPCRDPTLSSATYDEVLRYL
LQVNPILFTEVINTWPADVYNLGLISREVELAIERLKNTSTLGSNEEGVLSKLQEAMATL
YTSSGRHDKTLELIFEEGDIRCFDYIREHALYEAIRSRESLRRLFEISEQKASELLGNAP
ESLLPPEVVVPILQELGNRRWLFLYLDFIFSLDPSRAVIFHPMQVSLYAECAPEKLLQFL
KESSSYSLDNALEELSRFGENKFAKERVYILSRMGDLTTAMDIILFEMDQVNEAIQFCKE
HEDPSLWNRLLGFAENDGRILVALLYDPSVCYYTKFFCCKI
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcgagacaggagaagaagaggagccagtttttcatactagttattttctttcc
aacactgttggaatcagagaggaacaactggtaaatggaaataaaactgttgtaactgca
ataactgctggtaccaaagtaattgcctgcggtactttgaccggaagcatatatttggtt
gattgttcgggttctgttcttatcaaaagtttagaatgcaaacactcaaatgccgtgaga
gacctctctttgtcagaagacaactcagtggtagtgtcagttgggaaaggagacacaact
gtgtgtataagctttgtatttgaggagagaaatagtcttcaatataattactctaaatca
cgtcttttcacgggagcagaattgtcaagtgtagctgtggatcctttttttggaagagtt
agtagtcctcaaatgcagcgtttttgttttggaacgactgatggcgaattgttgctgcat
acaaaatcgtggttaggaggaggatcggatgccgtactgcatcatggggaaggacctatt
tattgtataaagtggcaaggtgaccttattgcttgggcaaataatcgaggaatacgaatt
ttcgatgttcgttttgaaagaggtgtgtgcattgtggatcctcctacagattggataccg
aatgaactctcttggttagcttccaatactgtttcatcaactttaggtccaagagagaac
aaggccaaaaaaagttcttcaatagagctaccttttgcatctttagaacctagactaact
tggcgtcatttgatatccgatacatattattctttatatgtatgttggtattcttgttgc
aaggttatttcagtatcttcgactgcggaaggaaaatcaggtcgacgtcaagttagagta
cttggaaatatttcaaaagatgaacttcatgtacgaaacattgttcaagttgccccattt
ggagataaggctgttgctatgttatgtgtgggtcaaccatcggatcaaaaagcactgttt
tatgctgacaagacaactgttgctccgattgcggacacattttcaatggagcttgtcatc
gtcagcctgtcacaaaacgatttgtcgaaaactagaacagaaagaaaagtgataaataat
attctcttttcggaagaacctctccagaaaaactctttatcaccatcgagacaaggtttg
gttcatattcctggtggtgaacctatactattagcgttcagtacttgcttaccagaatct
ttactatcaggtcatatagaagatgtttatgacgagaatagtgagaatgatgcctcacag
gcacggactggagctgtgtggaatgtccttagcttgcgtccattttcatatatagaaaga
atagaatggatgttggatagagaacgatatcgagaagctgttgaaattgcggagatggca
ccagctaaccaacttttggaatgtggtttcagtattgagaaacttggagaaagattcatc
aatcatctgttggaaaaaggtgactatgatacgttggcaattgtccttcctcgcatgatt
catggggaagataccgaatttgaaagcttcacgagcggcatcgaggcacacttaactgcc
aaaagaatggagaaagagtcttcagaaggtttgtatactttggaaagtcgaaaacgtcga
tgggagttttggattaagaaactgattcaaattggaaagctgcaatttgttgtatttgcc
attccctgccgggatccaacgttatcatcagcgacatatgatgaagttttgcgatattta
ctgcaggtgaatcccattctatttactgaagttataaacacctggccagcagatgtctat
aacttaggacttattagtcgtgaggttgaactagcgattgaaagattgaagaatacatcg
acattgggttccaatgaagaaggggttctttctaagttacaagaagctatggcgactctt
tatacgagtagtggaaggcatgacaaaacattggagttgatatttgaagagggagacatc
agatgctttgactatattcgagaacatgctctatatgaagccattcgtagtagagagtcc
ctccgaagactgtttgaaatttccgaacaaaaggccagtgaacttttaggaaatgctcca
gaatctctcctgcctcctgaagttgtggttcctatccttcaggaacttggcaatcgaaga
tggttatttctatatctcgatttcattttttcattagatccttcaagagctgtaatattt
catcccatgcaagtttctctttacgcagaatgtgctcctgagaagcttctgcaattttta
aaagaaagcagctcgtactcattagataatgcattggaagaactttcacggtttggtgaa
aacaagtttgccaaagaaagagtttatatattgagtagaatgggtgatctgaccactgct
atggatataattctttttgaaatggatcaagtgaacgaagcaattcagttttgtaaggaa
catgaagacccaagtttgtggaatagactcttaggatttgcagagaacgatggaagaata
ttagttgctctcctatacgatccctcggtatgttactataccaaatttttctgttgtaaa
atctaa
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