Galdieria sulphuraria: Gasu_07480
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Entry
Gasu_07480 CDS
T02926
Name
(RefSeq) ATP-dependent RNA helicase
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_07480
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gasu_07480
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
90S particles
Helicases
Gasu_07480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MFD_D3
Motif
Other DBs
NCBI-GeneID:
17090604
NCBI-ProteinID:
XP_005708522
UniProt:
M2XP94
LinkDB
All DBs
Position
Unknown
AA seq
496 aa
AA seq
DB search
MDQIMRTLFAGTSCTSIGKKDGRVSNKTENLKRKQPDSDMGGESHFPSDIARFESDSNSR
ANLERYMRKHLHIRLNKELRSPSLLLQFHELHTIFGVSEQLLKRLDSLGYHQPTPIQRQV
IPCMLSEMQVLACSATGSGKTLAFVIPIISKLLKSRDFGEKRLPQAVILEPTKEMVLQTE
RVVRNVAHNLSIQSCSLMSTRATSSNQLTFDIIVATPYSFLNELREGKVDLSGLSDIVFD
EADKMFEVQFLEQIDEILSYCPSALVGKHLFSATLPDAIETMSRSFIDDPVRVIVGRGSG
NGSFSCIDTIDQQLKFTGNESGKRFALEELFINGVAAPVLIFVQNKKRVEDLFRLLSRMK
ISTAFIHSDCSQEHRSRAVEDFKRGFVTVLVTSDLLCRGMDFRCIQTVINYDFPTSLSTY
IHRIGRTGRAGRRGVAISFFGEEDKAMIRPIANFIAACGSRLPDWIFSLPAPSKSQKRKL
ERRPPKRGDILPLKGT
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaataatgcggactttgtttgcaggcacttcgtgtacttctattgggaaaaaa
gatggtagagtaagcaataagacagaaaatctcaagagaaagcaaccagactcagacatg
ggaggagagtcgcatttcccgtcagatattgctcgcttcgaatcagactcaaactctagg
gccaacttagaaagatatatgcggaaacacctccatatacgtctgaacaaggaactgcgt
tcgcctagtttgttgcttcagtttcacgagctacatacaatatttggcgtttccgagcag
ctgttgaagcgtttggattctttaggttatcaccagcctacacctatacaacgccaggtt
attccttgtatgctcagcgaaatgcaagtattagcgtgttctgcaacaggaagcggcaag
actctcgcttttgtcattcctataatatccaagctgctaaagagtcgtgattttggagaa
aagaggttgccgcaagcagttattttggaaccaacaaaagaaatggtccttcaaacggaa
cgcgtggttagaaacgttgcacataatttaagtattcagagctgcagtttgatgagcaca
agagcaaccagcagtaaccaactaacttttgatattatagttgcaacgccctattcgttt
ttaaatgagctaagggaaggcaaggtagatctttctggcttatcggatattgtatttgat
gaggctgataaaatgtttgaggtgcagtttctggaacagattgacgagattctttcatat
tgcccttcagccttggttggcaaacatctcttctctgcaactttgcctgacgctatcgag
accatgtcgcgaagttttattgacgatcctgttcgtgtaattgtcggaagagggagtggg
aacggttccttcagttgtattgatacaatagatcaacagttaaagttcacaggcaacgaa
tctggtaaacggtttgccttggaggaactctttattaacggcgttgctgctccagtctta
atatttgtgcagaacaagaagagagtcgaagacttatttcgattactttctagaatgaag
atttctactgcctttattcactcggattgttctcaagaacaccgaagtcgtgcagtagaa
gacttcaaaagaggtttcgttacagttctcgttaccagtgacttgttatgtcgtggaatg
gattttcggtgcatacagacagtgatcaactatgactttccaacttccttaagtacatat
attcaccgcattgggaggactggacgcgccggaaggagaggagttgctatcagtttcttt
ggtgaagaagacaaggcaatgatacgacccattgccaattttattgccgcgtgtggttcg
cgattgccagattggatatttagtcttcctgctccttcaaagagtcaaaaaaggaaactg
gagcgaagacctccaaaacgcggagatattttgcctctaaagggaacctag
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