Galdieria sulphuraria: Gasu_08670
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Entry
Gasu_08670 CDS
T02926
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
KO
K12880
THO complex subunit 3
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03013
Nucleocytoplasmic transport
gsl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Gasu_08670
09122 Translation
03013 Nucleocytoplasmic transport
Gasu_08670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_08670
03041 Spliceosome [BR:
gsl03041
]
Gasu_08670
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
Gasu_08670
Spliceosome [BR:
gsl03041
]
Complex C
Other components
EJC/TREX
Gasu_08670
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
Gasu_08670
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_Aladin
EIF3I
WDR55
Beta-prop_RIG_2nd
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
DSE1_N
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
eIF2A
Tricorn_2nd
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
PAC11
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_NOL10_N
CFAP251_N
Beta-prop_Vps41
ASA1
WD_LRWD1
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
17090410
NCBI-ProteinID:
XP_005708307
UniProt:
M2XNM3
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MLTTNASSKIFSKASTAELVGHTRKVHCLSWNPKGGLLGSGGVDCVARIWDVEKLQQKAE
LEGHTSSIEQLKWDPTANVFFVSASLDHKVLFWDLRARNSEPVASVETQGENINLAWSQD
GVYCAVGDKDDNLSFIDVRKFDFFERFQFAEEVNEFKWSPSGPFFFMTLGKEVLVFRWPT
MEQQLRLQVHADRCYCLEFDRSGRYFALGGADSIISLWETEYMLCTWTVDRLEYPIRTIS
FSHDGQFIAAGSEDSVIDISDILNGRQTYALGVKGATNVVAWHPSRHLLAYATEEEYSRD
GVAIHLYGTISKDNI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgactaatgcttcatctaagatttttagcaaggcaagcactgcagaactagtt
ggtcatactagaaaggtccactgtctttcttggaatcctaagggaggcctactgggctct
ggtggagttgattgtgttgctagaatttgggacgtcgaaaagctgcagcaaaaagcagag
cttgaagggcatacaagctcgattgaacaactcaagtgggatcctaccgcaaatgtcttt
tttgtgtcagcatccttggatcataaagtacttttctgggatttgagagcgaggaacagt
gagccggtagcttctgtggaaacgcaaggagaaaatatcaatttggcgtggtcccaggac
ggagtgtattgtgctgttggtgacaaggacgacaatttgagtttcatagatgttcgcaaa
tttgatttttttgagcgttttcagttcgctgaagaagtgaacgagttcaagtggagtcct
tcaggtcctttctttttcatgactctgggtaaagaagttttggtttttcgttggccgaca
atggagcaacaactgcgattgcaagttcatgcggaccgttgttattgtcttgagtttgat
cgcagtggacgttatttcgctttgggaggggcagattccattattagtttatgggaaaca
gaatatatgctttgtacttggacggtcgatcgtcttgaatatccaattagaacaataagc
ttctctcatgatggtcagtttattgccgcaggttcggaagatagtgtaattgatatttca
gatattctgaatggtcgacaaacatatgcacttggagtcaaaggagcaacgaatgtggtt
gcgtggcacccttcaagacatctcttagcatatgctactgaggaagaatattcacgcgat
ggcgtcgctatacacctttacggcacaatttccaaagacaatatttga
DBGET
integrated database retrieval system
