Galdieria sulphuraria: Gasu_10830
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Entry
Gasu_10830 CDS
T02926
Name
(RefSeq) ATP-dependent RNA helicase
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_10830
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_10830
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gasu_10830
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
Pre-60S particles
Helicases
Gasu_10830
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
Gasu_10830
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
17090331
NCBI-ProteinID:
XP_005708224
UniProt:
M2Y783
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MDFHNLSREETMVGGGDAFIGVGRFANCCTFCSRYYYSRDRKSISFEKQFEILLSAKSSS
FNGHKDFIKGLEATDNPCKIFHPHFSRDCPNIHLRKQLFTESKRLSGAEDEFLRSSVTDG
VFRESHPSSSRSVKETRASTSFFDPTVTRSRGSSRKISANSTSAKLHSNNTRVSKKPASL
QVVEANETPVPFTSFQLSKKILEILEERGLRDATPIQSATFELIYSGRDIIGRSRTGTGK
TLAFVLPIMQKLVEQLETHNIDRVSEIQCLVLAPTRELAKQVEQEFSAFAKCFRFRTSCF
FGGSSYEVQQRAIKRGIDILVATPGRLIDLLERGSVDLLKVKFFVLDEADEMLSMGFAED
IDKISTYLPPTRERQTLLFSATIPPWVQELAKSNKNNPIIVDAIGNKDTKTSTTVEHIAL
RVPPTELSRKLILESVISVYSAEMTNFRCIVFARTKAEVDSLVSSGRIHNGAAQALHGDI
TQKQREITLSKFREGSFQVLIATDVAARGLDINGVDLVIQYRVPEDIDMYIHRAGRTGRA
GRQGTCIILYTDEERNKLTLMENVCKIRFRLESPPSIQQVIETKANGFLRASQAVEGKWV
EPLIPVVKEYIESLHIEGEEREKQFPFVLASLLAVAMGQLNMPQVSILSGEENMCPILVK
SKTVLTVSYIVRIVSRLLEDKGFESRVGLVSICADTKMAVFDLKNDIAERFVREANRSME
SSKSLSHLLFELCSVIPPLLEPNTAKSLERKREYHRRS
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggactttcacaatttgtccagggaagagacaatggttggtggtggtgatgcattcatc
ggcgttgggagatttgcaaactgttgtaccttttgtagtagatactattactccagggat
aggaaaagtataagctttgaaaagcaattcgaaatactcttatctgctaaaagtagtagt
ttcaatgggcataaggacttcatcaaaggacttgaggcaactgataatccttgcaagata
tttcacccacatttcagtcgcgactgtccaaatattcacctccgaaaacaacttttcact
gaatccaagaggttgagtggagcagaagacgagtttttacgttcaagtgtcacagatggt
gtgtttcgagaaagtcatccgtcaagtagtcggtcagtgaaggaaacgagagcctcaaca
agtttctttgacccaactgtaacgcgttcgcggggtagctctagaaaaatctcagcgaat
tctacttcggctaagcttcattctaacaatacaagagtttcaaagaaaccagctagcctt
caagtcgttgaagccaacgaaactcctgttccgtttacaagttttcagttgtcgaagaaa
attttagagatattggaggaacggggtttgcgagacgcgacgcctattcagtctgccact
tttgaacttatatacagtggccgggatataattggaagaagtcgtactggaacagggaag
acccttgcgtttgtgctccctattatgcagaagttggtggagcaacttgaaactcacaat
attgatcgagtctcggaaattcagtgcttggttttagctcctaccagggagttagcgaag
caagtggaacaagaattttcggcctttgcaaaatgttttcgttttcgcaccagttgtttt
tttggaggatcatcttatgaagttcagcaacgtgctattaaaagaggaatcgatatttta
gtagccactccaggacgactcattgatcttttagagagaggaagcgttgatttactgaaa
gttaagttttttgttttggacgaagcagatgaaatgctctcaatgggttttgctgaagat
attgacaagatttcgacctacttgccaccaactcgagagagacaaacacttttgttttca
gcaactataccaccatgggtccaggaacttgccaaatcgaataaaaataatcctatcata
gtagacgcgattggaaacaaagacactaagacgtcaactactgttgagcatattgctctt
cgtgttcctccaactgagctttctagaaagctaatacttgagtctgtgataagtgtgtac
agtgcagaaatgaccaattttcgctgcatagtatttgcaagaacgaaggcagaagtagac
tccttggtttctagtggccgaatccacaacggtgcagcacaagctttacatggagatata
actcaaaagcaacgagaaatcactctttccaagttcagagaaggttcatttcaagtttta
attgcaacagatgtagcagctcggggtttagatattaatggagtggatttggtaatacag
tatcgtgttccggaggatattgatatgtacattcaccgtgctggtcgtaccggtcgagcg
ggaaggcaaggaacttgtattattttgtacacggacgaagaacgaaataagcttactcta
atggagaatgtttgtaagatccgttttcgtttagaaagcccaccatctatacaacaagtg
atagaaacgaaggccaatggttttttacgtgcatctcaagccgttgaaggaaaatgggtt
gagccacttatacccgttgtaaaggaatatatcgaaagcttacatattgaaggagaagaa
agagaaaaacagtttccttttgttctggcttcgctgttagctgtggcaatgggtcagctg
aatatgccgcaggtgagtatattaagcggtgaggagaatatgtgtcccatactcgtcaaa
tccaaaacagtcttaactgtaagttatattgtccgtatcgtttcacgtttgttggaggac
aaaggttttgagagcagagttggacttgtatcaatttgtgctgatacgaaaatggctgtg
tttgatttgaagaatgatatagcagagagatttgtacgagaagcaaatagatcgatggag
tcgtcgaagagtctaagccaccttttatttgaactatgtagcgtgattccacctcttttg
gaaccgaatactgctaaaagtttagaacggaaacgagaatatcatcgaagaagttga
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integrated database retrieval system
