Galdieria sulphuraria: Gasu_13360
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Entry
Gasu_13360 CDS
T02926
Name
(RefSeq) SWI/SNF related-matrix-associated actin-dependent regulator ofchromatin subfamily C
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
Gasu_13360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_13360
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_13360
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
Gasu_13360
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
Gasu_13360
PBAF complex
Gasu_13360
GBAF(ncBAF) complex
Gasu_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_2
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
ZZ
Chromo
CDRT4
HVO_2718
C1_2
TMEM106_N
SWIRM-assoc_3
Motif
Other DBs
NCBI-GeneID:
17090019
NCBI-ProteinID:
XP_005707892
UniProt:
M2XMI1
LinkDB
All DBs
Position
Unknown
AA seq
1046 aa
AA seq
DB search
MSSSRSSPIKIEDFETPEAIQSFEAMASWMKNQPRDQLGFDASDITASTLARVTGELSVF
LETNLGKNSQTENRIITKFPQHVFRHTQPDSALCKILCLCFQFKEQQAWRRLDALNPDRK
EAVMNLLLDVEKNLRTTGILPPKKVFFSRSVAPSLVPKLKSIVQRHGGLVVSSATSATHI
IEPDVDIPTDSEDVSSEEYCRVLKREGDKVFVHWWYYPDSYDSWIPASEVDGSEIDEQSP
PKGPWHVQARFIIDLEKFNEWPNELDYEVPDDMITRTIADGKGKSVESEHGSQENRIDSN
HDLHEDNIPDSRRKRKLNEASLNVKDEPQDLENSDPSLEENSHILEKGRDENVNKNRKIT
HDVEIADTSQLQSKLNSEQLVERNKENTDTHGSGIQDSLMKTNELLKQEVENVTQTLEKG
MEQNNSTSIEHQKETTPTTLNLDPSNIETNHNELASFNDIGELTATLPEEPIFIPSYSRW
FRMDAIHDIEKRALSEFFTGQYPSKTPEVYMQYRNFTVQSWRADPKHYLTVTALRRHLAG
DACAIMRIHAFLEHWGLINYNIDASNRPSPTSFGSPPVIPLASHGSVTSGIPRLLFFDDG
SHPDMLDRSVDYRLPEAQMTRRELYATAAAATYYCEICGKDCSEFRYHCISQADMDICPS
CFSQGKFPSEFTNDQFVPMKAVSEASVGEETWSENETLLLLEGLEKYGENWDSVAEHVGT
KSKESCVLHFIRLPIEDSFLEEQLGKDFSYISREQNKKEDNDVLNSFVSEPFPFADTANP
IMAQVAFLASMVSPQVASAAARAALDALTKTSCDSENEKVSQVHSMQSTLESQVGRQATE
VMSEQLVSGVNNEANQENKSNLESEEAKMDSVSVQAAAAVALSAAGARGRILAEEESREI
ERLFAVALESKLKMLHMKMDYFEQMETITRREREKLERYRLQVVADRLSFAYSRVSGKLS
ESNTIFKVADGQVTKEPLEKEELILSIDSPTEAIPSQSFKKGPQPMIDPSQFYPNEDVSM
MEYVEQPNSTNSYLMEDHLLKWNDLQ
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttcgaggtcttctcctataaaaatagaagactttgaaactcctgaagccatc
caaagttttgaagctatggcctcttggatgaagaaccaaccacgagaccagttaggtttt
gatgctagcgatattacggcttcaacacttgcacgtgtaactggagagcttagcgtcttc
cttgaaacgaacttgggaaagaactcacaaaccgagaatagaataattaccaagtttcca
caacacgtttttagacatacgcaacctgatagtgcattatgtaagattctctgcttgtgt
tttcagttcaaagaacaacaagcctggagacgtttagacgccctcaatccggatagaaag
gaggcagttatgaacctgctgcttgatgtggagaagaatcttcgaactacgggaattctt
cctccgaagaaggtattcttttcgagaagtgtggctccaagtcttgtgccgaaactcaaa
tctattgttcaacggcacggtggcctagttgtttcttcagcaaccagtgctactcatata
attgaaccagacgtggatattccaacggactcagaagatgtttcgtcggaagagtattgt
agagttttgaaaagagagggcgataaggtttttgtccactggtggtattatcccgatagc
tacgactcgtggatacctgctagtgaagttgatggctcagaaatagatgaacaatctcct
ccaaagggtccttggcacgttcaagcaaggtttattatagacttggaaaagttcaatgag
tggccgaatgaattggattatgaagtgccagatgatatgattaccaggactattgcagat
ggtaaaggtaaatctgtggaaagtgaacatggttcgcaagagaatcgaattgattcaaat
catgatcttcacgaagataatattccagacagtagaaggaagaggaaactgaatgaggct
tctttaaatgtcaaggatgaaccacaggacttggaaaactctgacccatcattagaggag
aactctcacatcttggagaaaggaagagatgaaaatgtcaacaagaacaggaaaataaca
cacgatgtagagatagctgacacttctcaacttcaatccaagttgaattcggaacaatta
gtggaacgcaacaaagaaaatactgacacacacggcagtggaattcaagattcactaatg
aagacaaacgaacttttaaaacaggaagtggaaaatgttacccaaacactagagaaagga
atggaacagaataactcaacctccattgaacatcaaaaagaaacaacacctacaactctg
aatcttgacccatcgaatattgaaactaatcataatgaattggctagttttaatgatatt
ggtgagcttacggctactcttcctgaggaacctatttttataccatcatattcgagatgg
ttcagaatggatgccatacatgatatagagaagcgagcactctctgaattttttacgggt
caatatccctcgaagacacccgaggtttatatgcagtatagaaatttcactgttcagtct
tggagagcagatcctaagcattacttgacagtaactgcattgagaagacacttagctggt
gatgcatgtgctattatgagaattcatgcattccttgaacactggggcctcatcaattat
aatatcgatgcaagtaatcgaccatctccaacatcttttggatcacctcctgtgataccg
ttggcctcacatggttctgtgacaagtggaattcctcgtttattattttttgatgatggt
tctcatccggatatgttggatagaagtgtagactatagattaccagaagcacaaatgaca
cgtcgggaactttatgcgacagctgcagcagcgacatattattgtgagatttgtggaaag
gactgttcagagtttcgttatcattgtataagccaagctgatatggatatttgtcctagt
tgtttttcacaaggaaagtttccgtcagaatttacgaatgatcaatttgttccgatgaaa
gcagtatcggaagctagtgttggtgaagaaacctggtcggagaatgaaactttactttta
ttagaaggattggaaaagtatggagaaaactgggactctgtagctgaacatgtgggtaca
aagagcaaggaatcatgtgttttgcattttattcgtcttcctatcgaagactcatttctg
gaagaacagttaggaaaagatttcagctacatttcgagagagcaaaataagaaggaagat
aatgatgtattgaactcgtttgtaagtgaaccatttccttttgcggatacagccaatcca
atcatggcacaagttgctttccttgcttctatggtttctccacaagtagcttcagccgcg
gctagagcagctttagatgcgcttaccaagactagttgtgactcagagaatgagaaagtc
agtcaagtacattccatgcaatccactttggagtcacaagttggtaggcaagctacagaa
gtcatgtctgaacagcttgtgagtggagtgaataatgaagcaaatcaagagaataagagt
aatttggaaagtgaagaagctaagatggatagtgtatctgtacaggcagcagcggcagta
gctttgtcagctgctggtgctcgaggaagaattcttgcagaagaggaatcaagagaaata
gagagactgtttgcagttgcattagagtccaaattgaaaatgctgcatatgaaaatggac
tattttgaacagatggaaacgatcactcgtcgtgagagagaaaagctcgaacgatatcga
ttgcaagttgttgctgatcgactatcttttgcatattcacgagtatctggcaagctatca
gagtctaatactatatttaaagttgcagatggacaagttaccaaagagccattagagaag
gaagagttaatcctatccatagattcaccgaccgaagctataccttcacaatcctttaaa
aaaggaccacagccaatgatagatccatcccagttttaccctaatgaagatgtctctatg
atggaatacgtagaacaacccaactctaccaattcatatcttatggaagaccatcttttg
aaatggaatgatttgcaatga
DBGET
integrated database retrieval system
