Galdieria sulphuraria: Gasu_14080
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Entry
Gasu_14080 CDS
T02926
Name
(RefSeq) transducin family protein / WD-40 repeat family protein
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Gasu_14080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_14080
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
Gasu_14080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
DSE1_N
ASA1
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_SCAP
ANAPC4_WD40
WDR90_beta-prop_4th
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_IFT140_1st
WDR54
PAC11
Utp12
Beta-prop_Nup120_160
ARC6-like_IMS
SHKBP1_KCTD3_C
Motif
Other DBs
NCBI-GeneID:
17090092
NCBI-ProteinID:
XP_005707970
UniProt:
M2X4S2
LinkDB
All DBs
Position
Unknown
AA seq
879 aa
AA seq
DB search
MVKAYYKFSPYSLWGVVASRRVPSVTIDKEMASRFFQVNSVVVATAAVNLINLWNIRKIE
KVAQLGNLLDEEISSLHYAIGSSWILAGYNNGRIRVFSLETRKLEVLIHSHTSPTTTIVV
DESGFQLASGSGAGDIVLWDLSAEKGICRLRGHTNEVTKLKFCYFHSKQYLVSISKDSLL
KIWDLVGYSCVQTVVSTRGELWDFCIIPKLNILVIAASQPELEVFGILKPETRSLFTRQE
NDLEEESHFIVTLGNISLKSSKCTALCVDEAGCHLIVYGNDKSLQAFQLRNWEHAIRHLK
RRRKRHPETSSGTLDLVEHTALSTLQAVDFLIYRQTLQVPHRIRSIHLLHSISEQQKHSE
GFHQSIVMQFADNGLSLYDLLYEKESDEVFTLRQVANLDIHGHRGDVRSLTFSRQQNYLL
SVASSCTGKIWQVSNNLCLRTLSLSGYGTCCLFVCNDIFTVIGTKNGTLEIHCTLTGDSV
LQLADHEGPIWSVCESSDEKYLFTGGSDKKIHIYEMVICSTTSGTIPTIQLEPIRTLEMS
DEVLCLKTTPDGKLLIVALLDCTVRSFYLDSLRFYLSFYGHKMPVLSMDVTSDSYLLITG
SADKSIKIWGLDFGDLHKSLLGHENAVMNITCQPNTHYFFSASRDGLIKYWDADVFQLLM
NLKGHSGEVWTLAISSNGEILASAGHDKSIRQWRRTNEQLFLEEEEEARMDEALANSVIQ
ERRRSVSNLEASVHHITLGMESIPEVVSATTLNHMDVVENCEKILETLQLVQKECEREQE
EPEEAPDIQLLGLSRHMYLLRTLSKIRITDLESVLMLLPYYAAEQLLSFCSELLRLPCSR
LYADLLCRIEDKWNILHKASINCLVGVKRKLASISLHSK
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagcctattacaagttctcaccttattcattatggggtgttgttgccagtaga
agagttccttctgtaactatagataaagaaatggcttctcggttctttcaggtgaattct
gtagtggttgccacagcagcagtgaacctgattaacttgtggaacatcaggaaaattgag
aaagttgcccagttaggtaatctactcgacgaggaaatttcctctttacactatgccatc
ggcagtagttggattcttgcaggatacaacaacggtagaatccgggttttcagtctcgaa
acccgaaaacttgaagttttgatccactctcatacttctccaactacgactattgtggtt
gatgagtctggattccaactcgcttcaggttcaggtgctggagacatagtgctttgggac
ttgagtgcagaaaagggaatttgtcgtttgagaggccatactaatgaagttacaaaatta
aagttttgttactttcatagcaaacaatatctggttagtatttccaaggattccttatta
aagatatgggaccttgttggatattcttgtgtgcagacagtagtgagtactcgaggtgaa
ttgtgggatttttgtataatcccaaagttgaatatacttgttattgctgcatcacaacct
gaactagaagtatttggtattctcaaaccagaaacgcgttctttgtttacaagacaagaa
aatgatctcgaagaagaaagtcatttcatcgtcactttgggaaatatttcactcaagtct
tccaaatgcacagcgttatgtgttgatgaagcgggttgtcatttgattgtttatgggaat
gacaaaagtttacaagcgtttcaactgaggaattgggaacatgcaataaggcatttgaag
cgtagaagaaagaggcatccggaaacatcttctggaacgcttgatttagttgaacatacc
gcgttgtcaactttgcaggcagttgactttcttatttaccggcagacattgcaagttcct
caccgcattcgatccatccatttgcttcattcaatatccgaacaacagaagcattcggaa
gggttccatcaatccattgtcatgcaatttgccgataatggattgagtttgtatgaccta
ttgtatgaaaaagagtcagatgaagtttttacattacggcaagttgccaatttagatatt
cacggtcatcgcggggatgtacgtagtctaacgttctctcgacaacaaaattacttgtta
tccgttgcctcttcttgtactggaaaaatatggcaagtatccaacaatctttgtttaaga
actctatcgttaagtggctacggaacttgttgcctctttgtttgtaatgatatttttact
gtaattggaaccaaaaatggtactttggagattcattgcactttaactggagactccgta
ctgcaactagctgatcatgaaggtcctatttggagcgtatgtgaatcgtccgatgaaaaa
tacttgtttactggaggcagtgacaagaagatacacatttatgaaatggtcatctgcagc
acaacatcaggtaccattccaactatccaattggaacctattcgaacattggaaatgtct
gatgaggtgttgtgtttaaaaactacaccagatggaaagcttttgatagtagccttgtta
gattgtacagttcgttcattttatttggattctcttcgtttctaccttagtttttatggt
cataagatgccagtgctttcaatggatgtaacgagtgattcctatttgttgataactggt
tctgcagacaagtcaatcaaaatttggggtttagattttggagacctgcacaagagtttg
ttgggacatgaaaacgctgtaatgaacattacttgtcaaccaaatactcattatttcttc
agtgcttcacgtgatggcttgatcaagtattgggatgcggatgtatttcaattgttgatg
aatttgaaaggtcactctggagaagtttggactcttgcgatatcttccaatggagaaata
ttggctagtgctggacacgataaaagtattcgacaatggagaaggaccaatgaacagttg
tttcttgaagaagaagaagaagcaaggatggatgaagcattggcgaattctgttatccag
gagagacgtcgaagtgtctcaaacttggaggcttccgtgcatcacataactttaggaatg
gagtccattccagaagtagtcagtgctacgacattaaaccatatggatgttgtagagaat
tgtgagaaaattttggaaactttgcaactcgttcaaaaagaatgtgaaagagaacaagaa
gaacctgaagaagctccagatattcagctattgggactgagtcgtcatatgtatctgtta
agaacgctatccaaaataaggataactgatttggaatctgtactcatgttgcttccttat
tacgcagctgaacagcttttaagtttttgttcagagttgttacgtttaccgtgcagtaga
ctctatgccgacttgttatgtaggatcgaggacaaatggaatatcttacacaaggcatcc
atcaactgcttagtcggagtaaaaagaaagttggcttcaatatcgctgcactcaaaatga
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