Galdieria sulphuraria: Gasu_16160
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Entry
Gasu_16160 CDS
T02926
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gasu_16160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_16160
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Gasu_16160
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
Gasu_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4349
Motif
Other DBs
NCBI-GeneID:
17089793
NCBI-ProteinID:
XP_005707637
UniProt:
M2XLQ3
LinkDB
All DBs
Position
Unknown
AA seq
720 aa
AA seq
DB search
MTNRKLQAEIDKVLRKVEEGATQFEEIWLKVYDSSSFAQKEKHENDLKREIKKLQRLRDQ
LKVWQNDSSIKDKSKIDASRKLIEEKMEKFKVCERETKTKAFSKEGLSLDRTDPKNREKQ
RIREWVTECINSLRVQCDTMEAEVESLSKSKKKKGDNEKLASLTHRLTRHRYHIDMLERL
LRAVDNENVSFEDAAELKESVEYYVYNNDDPDFVEDTSVYESLNLEKAINVMPASTISLE
SGIICKPEDSSSSRTSEELTGKTKATVTDTSASHSSNQKISSTQQPTGNKEVSPKTILST
KDSNNNNKGVGSSPRPSQPFTAKNYAATKNSGTSNPAATSSRSEGNVSVSSAWGNVINAA
GKSLNSVNQSLKTSPPRRPFAAAVLEGLQSSKKDERSSSSETPEEENFSVQKQNSFGYST
ANKSSFAESEKKDETGKFSSQVKLDRSANSSKWVPRSQALSSSEESIKLANRKTKQRMDE
NVSSTLGQEGSAEVSAEVSEGTPTLSGSNDSDRSDGGKEVASSRLSMSSSPSSPSIQGSY
PPSKHSTPFIQNDTSLTEGVLGGAFRQEERAATQTLLDASLRCMPEPLDVDLPKNYIPRN
PSKYVPTCFPTAPPPMLLSPSLFQHFDTDTLFFIFYFQPGTYQQYLAAKELKRQSWRFHR
KYMTWFQRHEEPQVVESDYEQGTYVYFDYALNDDAGWCQRIKSEFTFEYAYLEDELPIDS
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaccgaaagttacaagcagaaatagacaaggtgttgagaaaagttgaagaaggt
gctactcagtttgaagaaatatggttaaaggtttacgattcttcttcctttgcacaaaag
gagaaacatgaaaacgacttgaaaagggagattaaaaagcttcagagattgcgcgaccag
ttgaaagtgtggcagaatgactcttcgataaaagacaaaagcaagattgacgcgtcaaga
aaacttattgaagagaaaatggaaaagttcaaggtttgtgagagggaaactaagaccaaa
gctttttccaaagaggggctttccttagacaggacggatccgaagaacagagaaaagcaa
aggatacgtgaatgggtaacggaatgtatcaattcccttcgtgtacagtgcgatacgatg
gaagctgaagtagagtcgttgtccaagtcgaagaagaagaagggagacaacgagaaactc
gcttcattgactcaccgacttactcgtcaccgttatcatattgatatgttggaacggcta
ctaagagctgtggataacgagaacgtttcttttgaggatgcagcagaattgaaggaaagt
gtggaatattatgtatataataatgacgacccagactttgtagaggacaccagcgtttac
gaatctttgaacttggaaaaagctatcaacgttatgcctgcttcaactatttcgttagaa
agtggaattatttgcaaacctgaagattcgagctcttcaagaacttcagaagagcttaca
gggaagacgaaagctactgtgacggacacaagtgcttctcattcgtcgaatcaaaagatt
tcaagcacacagcagccaaccggaaataaggaagtttctccgaaaacaattctttccaca
aaggatagcaacaataataacaaaggagttggaagttcacctcgtccaagtcaacctttt
acagcaaagaactatgcggcgaccaagaacagcggaacaagtaatccagcagctactagt
tctcgttcagaagggaacgtatctgtatccagcgcttggggaaatgttatcaatgctgca
ggcaaatcactaaactccgtaaaccagtcgttgaagactagtcctcccagaagacctttt
gcagctgcagtgcttgaaggattgcagtcttctaagaaggacgaacgttcttcctcttcc
gaaactcctgaagaagagaatttttctgtacagaaacagaattcatttgggtattctaca
gcaaacaagtcttcctttgcagaatcagagaagaaggatgaaacaggaaagttttcctct
caggtgaagttggatcgatccgcgaattcctcaaaatgggttccacgctcacaggcattg
tcctccagtgaagagtcgataaaactggcaaacagaaagacgaaacaaaggatggacgag
aatgtatcaagcacattaggtcaagaaggtagtgctgaagtttctgctgaagtatcggaa
ggaacaccgacactttcaggatcgaatgatagtgatcgctcggatggaggaaaggaagtg
gcaagtagtagactgtctatgagttcttctccaagtagtcccagtattcaaggttcttat
cctccgagcaagcactcgactccgtttatccaaaatgacactagtttgacggaaggagtt
ttaggtggtgcatttcgtcaagaagaaagagctgctactcaaactctgttagatgcatct
ttgcgttgtatgccggaacctttagatgttgatttgccaaagaattacattcctagaaat
cccagcaaatatgttccaacctgttttcccactgctcctcctcctatgttattgagtcct
tcattatttcaacattttgacacagatacgctattttttatcttttattttcagcctgga
acctatcaacaatatttagcggcgaaagagttgaagagacagtcttggaggtttcatcgt
aaatatatgacttggttccaacgacatgaggagcctcaagtggttgaaagtgattatgaa
caaggcacttatgtatattttgactatgctttgaatgatgacgctggatggtgtcaaagg
attaaatcagagtttacttttgaatatgcttacttagaagacgagttacccatagattcc
tga
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