Galdieria sulphuraria: Gasu_16910
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Entry
Gasu_16910 CDS
T02926
Name
(RefSeq) transcription initiation factor TFIID subunit D4
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Gasu_16910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_16910
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_16910
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Gasu_16910
Coactivators
SAGA/TFTC/STAGA complex
Gasu_16910
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
Gasu_16910
STAGA complex
Gasu_16910
TFTC complex
Gasu_16910
SAGA complex
Gasu_16910
SLIK complex
Gasu_16910
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
TFIID_NTD2
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IP5PC_F
Beta-prop_WDR19_1st
LisH
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
Beta-prop_VPS8
WD40_like
Beta-prop_NUP159_NUP214
WDR54
VPS8_N
Motif
Other DBs
NCBI-GeneID:
17089618
NCBI-ProteinID:
XP_005707443
UniProt:
M2Y4Q0
LinkDB
All DBs
Position
Unknown
AA seq
600 aa
AA seq
DB search
MPNDQDTFLFRFVLEYLQRKGYKGAAEALRNALVSEVSEDFHNPSLDMDDQVRNFLEFFL
YVREEEKGLLEDYGKIYRWIDGCLEVIRVELGQLTYPLLVYLYLDLIRRERYEESLKLLD
EWAPKFFEQSIRDELFSLKGVRRKEQLSENPVAQLYLKHRREIFVSQYAFELLCDFLVEH
RLTCIFRCIMEHFHVRLEKDSQVIVSEDLKSSIGFFPQKEFEELQKNEIHWKPLKESDYV
VQEQDSQLESHTTLEGNALDSNEEHPSISLPKYPLGSAMLETEDDKLRRVSLGGVEALPS
SLMYTFSNTYDEMNCVDISVDGSVIVAGFDDSFIRFWDGKECGQYRLVGGKPLIGHCGSI
YSVSLSPCGRFFLSSSEDGTVRLWSTKLERDLVVYRGHLFPVWSVEFSPLSHYFVSGGHD
RLGRLWTTDRIFPLRLFGGHYSDVEVMRWHPNCCYVASGSSDRTCRLWDLRNGNSVRLLG
PHSASVCSLVFSNDGKKLVIGLENGQIEFWDIVQGRRMSRVEGHKGPVWCLDVSKDDMFF
VSGSSDCFIHLWNAQSLDSSLQSTLSRDQILVKSFQTKDSAVYCARFSRKNLLLVAGVAL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccaaacgatcaggatactttcttgtttcgttttgttcttgaatatttacaacgaaaa
ggttacaaaggtgctgcagaagcgttaagaaatgctttggtatcagaggtttcagaggac
tttcacaacccgtctctagatatggacgatcaggtgcgaaactttttggaattctttttg
tatgttagagaggaagagaaaggtctattagaggactatggtaaaatctatcgttggatt
gatggttgtctggaagtcatacgtgttgaacttggacagttgacatatcctctccttgta
tacttatatttggacttgatacgaagagaacgttatgaggaatcactaaaactgttggat
gagtgggctccaaagtttttcgaacaaagtattcgtgatgagctattttctttgaaaggc
gttcgaaggaaagaacagctcagtgaaaaccctgttgctcaactctatttgaagcatcga
cgagaaatttttgtttctcaatatgctttcgagcttttatgtgactttttagtggagcac
cgcttaacttgtatatttcgttgtatcatggaacattttcatgtgaggttggaaaaggac
tctcaggtaatagtctcagaagacttaaagagttctattggtttctttcctcaaaaggag
tttgaagaattgcagaagaatgaaattcattggaaacccttgaaagaatcagactatgtg
gttcaagaacaagattcgcagcttgagagtcacacaactttggaaggcaatgcacttgac
tcgaatgaagagcatccctctatttccttacccaaatatcctttaggttcagcaatgctt
gaaacggaagatgacaaattgcgtcgggtatcattaggaggagttgaagcacttccatca
tctttaatgtatactttttccaatacatacgatgaaatgaattgtgtcgatatttctgta
gatggctctgtgattgttgctggttttgatgattcttttattcgtttttgggatggcaaa
gaatgtggacaatatcgccttgttggagggaaacctttgataggacattgtggaagtatt
tattcggtatctctcagtccttgtggacgtttctttcttagttcatcagaagatgggact
gtacgtctttggagtacaaagttggaaagagatttggttgtttacagaggccatttattt
ccagtttggagtgttgagttctcacctctttcacattactttgtatctggtggacatgat
cgacttggaaggttatggacgacggatcgtatatttccattgagactttttggtggccat
tattctgatgtggaagtcatgcgttggcatccaaattgttgttatgtagcttcaggctca
agtgatcgtacttgtcgactatgggatttgagaaatggtaatagtgttcgcttattgggt
cctcattcggcttccgtttgttcactggttttttcaaatgatggcaaaaaattagtcatt
ggtttagaaaatggtcaaatagagttttgggatattgttcaaggtcgacgaatgagtcgt
gttgagggacataaaggccctgtatggtgcttagatgtctccaaagacgatatgttcttt
gtaagtggatcatcagattgttttattcatctttggaatgcacaatcacttgacagttca
ttacaaagtactttgtcgagagatcagatattagtgaaaagtttccaaacgaaagattct
gcagtttattgtgctcgtttttctaggaagaatttattacttgttgccggagttgccttg
tag
DBGET
integrated database retrieval system
