Galdieria sulphuraria: Gasu_17220
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Entry
Gasu_17220 CDS
T02926
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsl03041
]
Gasu_17220
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
Gasu_17220
Spliceosome [BR:
gsl03041
]
Complex C
Other components
Complex C specific factors
Gasu_17220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_30
ResIII
nSTAND3
AAA_19
AAA_16
AAA_7
Motif
Other DBs
NCBI-GeneID:
17089649
NCBI-ProteinID:
XP_005707475
UniProt:
M2X3H9
LinkDB
All DBs
Position
Unknown
AA seq
721 aa
AA seq
DB search
MAKAFLKPGEVSSRKQFQEPNSSRLLGIGESSYDYESIIAASMVARNTSLPIHNYKEALL
YAVKEYRTVVVVGETGSGKTTQIPQYLLKAGWTDHGRAIVCTQPRRIATTAVAARVAEEL
DESKGTLGEVVGFAVRFDNCWDSERTKILYATDGTLLRMMLTDPLLLKFQVVMLDEVHER
TIATDILCGLLKKIQRLRSDLRVIISSATVDAEKFRDFFETNVTEDCSSNTAIILSVEGR
SFPVDIYYTTYPVQDYLQAAYETTLEIHRKQQDGDILIFVPSSEQVDHLLERFQSNEFQI
CSLRKDRKRLCCVPLYSGLSYREQLATFQPAPSNERKVVVSTNIAETSVTIQGIVFVIDT
GFCRMRVHSPETGMDLLCIQSISRASADQRAGRAGRSCPGKCYRLYTEDCYWKLLTENSV
PEICRTNLATAILQLKAIGIENVMNFSFIDPPSAKSVATAFEVLYAIDAITEDGVLSDFP
GMVMADLPMEPFLARTLVAAKDFECVREIITIIAMLQVEQVPGDSVFKYSSSREHKSFEA
ARKPFGVAEGDLLTLVNIYDAFEASGHSMRWCSNHGIVPRLMKKARLLRRSIALSLSNVM
YGLYGSAALSKADGLLSQKNPDPSSVIKATLKGFFMNSAVVQPDGSYLTLVGKRSVTIHP
SSVLASRLPKYIVYCESIHLKRIYIRNITVIEPQWLIQVAPHVFEKRKSRIEEKWKNLIS
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagctttcttaaaacctggagaagtttcttcaaggaagcagtttcaagaacca
aattcctcacgacttctcggaataggagaaagttcctatgattatgaatccattatcgct
gcttctatggttgcaagaaacacttcgttgcctatccacaactacaaggaagctttgtta
tatgctgttaaggaatatagaacagtcgtcgtagttggagaaactggttctgggaagacg
acgcagataccacaataccttctaaaagcaggttggacggatcatggcagagctattgtg
tgtacgcaaccacgtcgaatagcgacaactgcggttgcagctagagttgcagaagaattg
gatgaaagtaagggaactttgggtgaagttgtaggtttcgctgttcgtttcgataattgt
tgggactcggaaagaaccaaaattttgtatgctactgatggaactctattacgtatgatg
ctcactgatcctctgctactaaagtttcaagttgttatgttggacgaagttcacgaaaga
actattgctactgatattctatgtggactattgaagaaaattcaaagacttcggtcggac
ttgcgtgtcattatttcttcggctacggtggatgccgagaaatttcgagacttttttgaa
accaacgtcactgaagattgttcatcaaatacagccattatccttagtgtggaagggcgc
agtttcccagtagatatatattacacgacatatcctgttcaagactatcttcaagcagct
tatgaaactaccttagagattcatagaaagcagcaagatggtgatattttaatatttgtt
ccttcgagtgaacaagttgatcatttgttggagcgatttcagtcgaatgaatttcagata
tgcagtttgagaaaggatagaaaacgtctctgttgtgtaccactttatagtggtctttct
tatagagagcaacttgccacatttcaacctgctcctagtaatgaaagaaaagtggttgtg
tcaacgaatattgcagaaacttccgtgacaatacaaggcattgtttttgtcattgataca
gggttttgtcgcatgagggttcattctccagaaactggtatggacttgttgtgtattcag
tccatttcacgagcatcagcagatcaaagagcaggcagagcagggagaagctgtccaggg
aaatgttatagattgtacacggaggactgttattggaaattgttgacagagaattccgtt
cccgagatatgccgaacaaatttagcaacagctattcttcaactcaaagccataggaatc
gaaaatgttatgaacttctcatttatcgatccaccttcagcaaaatcggttgcaacagca
tttgaggttctttatgccatagatgcaattaccgaagacggtgtcttatcagattttcca
ggaatggttatggcagaccttccgatggagccctttttggcacgtactcttgttgcagct
aaggactttgaatgtgtgagagagatcattactattattgctatgctacaagtggagcaa
gtacctggagacagtgttttcaagtattcttcttctcgcgagcacaagtctttcgaggca
gctaggaagccttttggcgttgctgaaggtgatctattgacccttgtcaatatttatgac
gcctttgaagcttctggacattcaatgaggtggtgcagtaatcacggaattgtacctcgg
ttgatgaaaaaggctcggcttttgagaagaagcattgctttgtccctttctaatgttatg
tatggtttatatggatcagctgcactgtcaaaggcagatggattgctttcacaaaaaaat
cccgatccctcaagtgtcatcaaagcaactttgaaaggattctttatgaactctgccgtt
gtgcaacccgatggtagttacttgacattggttgggaagaggagtgttacaattcatcct
tcctcagttttggcaagtaggcttccaaagtatattgtatattgcgaaagtattcatttg
aaacgaatttatattcgaaatattacagtgattgaaccacaatggcttatacaagttgct
cctcatgtctttgaaaagagaaaatctcgcatagaagagaagtggaaaaatttaatttca
gaatga
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