Galdieria sulphuraria: Gasu_17500
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Entry
Gasu_17500 CDS
T02926
Name
(RefSeq) DEAD box ATP-dependent RNA helicase, putative
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsl03041
]
Gasu_17500
03016 Transfer RNA biogenesis [BR:
gsl03016
]
Gasu_17500
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gasu_17500
Spliceosome [BR:
gsl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Gasu_17500
Transfer RNA biogenesis [BR:
gsl03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Gasu_17500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
Helicase_C
Motif
Other DBs
NCBI-GeneID:
17089677
NCBI-ProteinID:
XP_005707508
UniProt:
M2Y4U2
LinkDB
All DBs
Position
Unknown
AA seq
729 aa
AA seq
DB search
MSAFEELGVLPEIIKAVEDLDWSLPTPVQAETIPLVLGGGDAMVSAETGSGKTGAFCLPL
VQVCYETLQGKFLQITKQPNHNDKSTSLWFKSDYNLIIDREQTELENKLPNRWQGARASL
GANNGRWYFEVKVLSDGLCRVGWATEECSLDLGTDSEGLGYGGTGKKSHNREFANYGEPY
GEGDIIGCFIDFEESRLFFSKNGTILQTAFEIPAALKNCTFYPSVCLKKCRVQVNFGPVS
SKNFMDSFRMISESPLCIEKTYSTGDSSKRKKNRRGPLALILEPSRELALQVKEEIGKFS
KYLSPTIRCACLVGGEKISQNIHALDNGVEVVCGTLGRIQECIEGGHLVLSSLRFLVLDE
ADAFLHQNQMESIIGIYSRVEEQNLVGGVQVLFFSATLHSPEVHELSEKIQQSPMVVDMK
GRDYVPEEVEHSVFFVDPSQNTTDSKDFSVHTDGVHEPEGQSTLEEWSSQRIKQMKTVLV
RKLIESFSMEQALIFVRTQLDADNLHHYLKNISLRNKSGYGKDERYSSVVLHGGISARER
KANLQNFKSGEARFLICTDVAARGIDVEGVPYLINVTLPDNVETYVHRVGRVGRSERLGL
AISLVGTKPEKVWFHRCPSRGRNNQCKNRRLLSEGGCTIWYDEMEIFKQIQKHLSLQVIT
LDSSFQLPVDNRKHFGYQSKEMEAIAAIQKKVDCLKPITTAVIELEDQVQKNFLALSHRF
SLNHFNFCS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccttcgaggaactcggtgtacttccagaaatcataaaggcggtagaagacttg
gactggtcactacctactcctgtacaagctgaaaccattcctttggtgttgggtggtgga
gacgcaatggtttcagcagagacgggaagtggaaagacgggtgctttctgtttaccttta
gtacaagtttgctatgagaccttgcaaggaaaattcttgcaaatcacgaagcaacctaat
cataacgataaatcaacaagtttgtggttcaaaagtgactataatctcatcattgacaga
gaacagacggaactagaaaataaattacccaatagatggcaaggtgccagagctagtctt
ggagcaaataatggacggtggtattttgaagtaaaagttttgtcggacggactttgtaga
gtaggttgggcaacagaggaatgttctttggatttaggaacagatagtgaaggtcttggt
tatggtggcactgggaagaaatctcataatagagagtttgcaaactatggcgaaccttat
ggggagggtgacattataggttgttttattgattttgaagaatctaggttattcttttca
aagaacggaacaattttacaaactgcgttcgaaattcctgcagcgcttaagaattgtact
ttttatccttcggtctgtctaaagaaatgtcgagtccaagttaactttggtccagtttct
agcaagaacttcatggattcttttaggatgatttcagagtctccattatgtattgagaaa
acttattctaccggagattcgtcaaagagaaagaaaaatcgtcgtggtcctttggctctc
attttagagccttctagggagcttgctttgcaagtaaaggaggagattggaaaattttca
aaatatttgagtcccacgatacgctgtgcctgtttagtgggaggagagaagatttcgcag
aatattcatgcattagataacggtgtagaagtggtttgtggaacattgggtcgtattcaa
gagtgtatagaaggaggacatttggttttaagtagtctccgctttcttgtgctcgacgaa
gctgatgcatttcttcatcaaaaccagatggagtctattataggaatctacagccgtgtt
gaagagcaaaatcttgttggaggtgttcaagtactgttcttctctgccacattacactct
cctgaagttcatgaactttccgaaaagattcaacagtcacccatggtggtggatatgaaa
ggaagagactatgtacctgaagaggttgaacacagcgtcttctttgttgatcctagtcaa
aacacgactgactcaaaagacttttcagtgcacacagatggagtgcatgagccagaaggc
cagagtactttggaagaatggagctctcaaaggatcaaacaaatgaaaacggtattagta
cggaagttgattgaatctttctcgatggagcaagctttgatatttgtccgaactcagtta
gatgccgataatttacatcactatttaaagaatatttctttgagaaacaagagtggatat
ggtaaagatgaacgttattcaagcgtggtgcttcacggaggcatcagtgcaagagaacgc
aaggccaatttacagaactttaaatcaggtgaagcccgatttcttatttgtacagatgta
gcagcgcgaggcattgatgtcgagggagttccgtatcttatcaatgtgacgttacccgat
aatgtagaaacttatgttcatcgtgttggccgtgttggtcgctctgaaagattaggtttg
gctatttcactggttggaacgaagccagaaaaagtttggttccaccgttgtccaagtcga
ggtcgcaacaatcaatgtaagaacagaaggctgttgtctgaaggaggctgtactatttgg
tacgatgaaatggaaatattcaagcaaatccaaaaacatttatcccttcaagtaattact
ttagattcaagttttcaactgcctgtggacaacagaaaacattttggatatcaaagtaag
gagatggaagccattgctgccattcagaaaaaggtagactgtcttaaaccaattactacg
gctgtcatagagttggaagatcaagtacaaaagaattttttggcattatctcatcgtttt
tctttgaatcattttaacttttgtagttaa
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