KEGG   Galdieria sulphuraria: Gasu_18320
Entry
Gasu_18320        CDS       T02926                                 
Name
(RefSeq) exosome complex component RRP43
  KO
K12586  exosome complex component RRP43
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Gasu_18320
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsl03019]
    Gasu_18320
Messenger RNA biogenesis [BR:gsl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     Gasu_18320
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 17089512
NCBI-ProteinID: XP_005707335
UniProt: M2X360
LinkDB
Position
Unknown
AA seq 287 aa
MHSLGWDIWNAVQPKEFYKGFLRRSIRPDGRKLSEYRDITLRKGPLVTTVDGSANASIGR
TVALIGIQPKVIEWKETKKGSARSIVGQHCSLQVEFPSVCHRDIRSGRTLEEALLVKESL
ENVLEQILERDSFCIVPDKFYWHLQITAYCLSLDGNVIETFLLALYGALLDLQLPVVRAS
TSGDLLTLDPNQPKVTLPMKKLEDWPWVVPIGLFWNGPSEYYAVLDLSEEEENNMSSIVW
IWNSQRGDKLAISKQKVGPLSVNILQEVLQLVKAHIDEVILRLQHGK
NT seq 864 nt   +upstreamnt  +downstreamnt
atgcactcgttgggttgggatatttggaatgccgtgcaaccaaaggagttctacaaaggc
ttcttgcgaagaagtattcgacccgacggaagaaagctatctgaatatcgagacatcact
ttaagaaaaggtcctctggttacgacggttgacgggtcagcaaatgcctcaattgggcga
acagtggcgttgataggcattcaaccgaaggtgatcgagtggaaagagaccaaaaaggga
agtgcaaggtcaatcgtgggccaacactgttccttacaagttgaatttccttccgtttgc
catagagacattcgaagtggaagaactttggaggaggcactcttagtaaaagagtcactg
gaaaacgtattggaacaaatactagaaagagattcgttttgtatagttccggataaattc
tattggcacttacaaataactgcatattgcctcagcttagacgggaatgtgattgaaaca
ttcttgttagcactgtatggtgccttgttggaccttcaattgccagtagtacgagcaagc
acctcaggtgatcttttaactcttgatccaaatcagcctaaagtgacacttccaatgaag
aaactcgaagattggccttgggtcgttcctattggattgttttggaatggtccttcagaa
tattatgctgttttggacttatctgaagaagaagaaaacaatatgagctcaattgtatgg
atatggaatagtcaaagaggagataaattggcaatctcgaaacaaaaagtaggcccattg
tctgtaaacattctacaggaagtcttacagctggtaaaagctcacatagatgaagtaata
ttgcgattgcaacacgggaagtga

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