Galdieria sulphuraria: Gasu_19890
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Entry
Gasu_19890 CDS
T02926
Name
(RefSeq) DNA excision repair protein ERCC-3
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03022
Basal transcription factors
gsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Gasu_19890
09124 Replication and repair
03420 Nucleotide excision repair
Gasu_19890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_19890
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_19890
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gasu_19890
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Gasu_19890
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Gasu_19890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
17089456
NCBI-ProteinID:
XP_005707270
UniProt:
M2X2Z4
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MNVEIQRKVRKRGRQAALKDLETKSQLTEDERDQDEDDTVSMPLPKQALYSFAEREEPNN
KVASTEQTGIPNLADFSQLKLKVDHERRPLWVCPSGKIFLETFSPLYKQAYDFLVAVSEP
ASRPEFIHEYMITPYSLYAAVSVGLETETIIRVLERLCKTTLPKEIVELITSSTKTYGKA
KLVLHRNIYYIQSRFSTVLDTLLKDPLLAECCARTTMGLLEQKNLALTEVKNGSLLKDDD
LVHNIERALEEDDLDEPYSEQRGLKGSSEVLGIEIIAEKVEHVKRRCIELDYPLLEEYDF
RNDIRNPNIEMDLKATTQVRPYQEKSLSKMFGNGLARSGVIVLPCGAGKTLVGVVAACTI
KKPTLVLCTSAVSVEQWRHQFLLWSTIDDKNISRFTADIKVKKDSGWLGSVTITTYTMVA
FGGKRSRESQEILEEMRSREWGLILLDEVHVVPANMFRKVLGVIKAHCKLGLTATLVRED
EKIEDVNFLIGPKLYEANWLDLQQNGYLATVQCAEVWCPMTAEFYREYLIQNSAKRKLLY
TMNPNKFQTTDFLIRFHENRGDKIIVFSDNIFALRTYARRLARPFIYGPTSQAERMRIFY
QFQNNPALGTIFISKVGDTSIDLPEANVIIQISSHYGSRRQEAQRLGRILRPKPRSGQHF
NAYFYSLVSTDTQEMYYSSKRQQFLIEQGYSFQVITHLEGMQEERHHLAYYRKEEQLSLL
AAVLAADEKETEEEFVEDSDPSGDVARILSKDGRQLTKRTNRSLRKLSGADGLVYREYDT
AQTKNVSSIFERKVIHHPLFRKRLSKK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtggaaatacaacgcaaggttagaaaacgcggtagacaggcagcgttgaaagac
ttggaaacaaagtctcaactaaccgaggatgagagggaccaagatgaagatgacacagtt
tccatgccattgccgaaacaagctctgtattcctttgccgaaagagaagaaccaaacaac
aaagtggcgtctacagagcagactggtattccaaacctggcagatttttcacagttaaaa
ctaaaggttgaccacgaaagacgacctttgtgggtttgtccttcaggaaagatatttcta
gagactttttctccgctttacaagcaagcttatgactttttggttgcagtttctgaacct
gcaagtagaccagagtttattcacgaatatatgataacgccatactctctttacgcagca
gtttctgtaggcctcgaaaccgaaactattatcagagttctggaacgtctatgcaagaca
accttacctaaagaaattgtggaattgataacctcgagcacaaagacatatggaaaggca
aaacttgttttacatcgaaatatttattatattcaaagtcgcttttcaacagtgttagat
acgctactgaaggatcctttgctggctgaatgttgtgcgcgaacaacaatggggttgttg
gaacagaagaatcttgctttaacggaagtaaaaaatggttcattgctaaaagatgacgat
ttggtacacaatattgaaagagccttggaagaagatgatctcgatgagccgtattctgaa
caaaggggcttgaaaggttcttcagaggtacttggaatagaaataattgcggaaaaagtt
gagcacgtgaaacgtcgatgtattgaattagattatcctctgttggaagaatatgacttt
cgtaacgatattagaaatccgaatatagagatggatctgaaagcaacaacccaggtgcgt
ccttatcaagaaaagtcgctttcgaaaatgtttggaaatggtttggcaagatcaggagtc
attgtgttaccttgtggtgcagggaagacgttggtgggagttgttgctgcttgtaccata
aagaaaccgacattagttctttgtacctctgcagtttctgtggaacagtggcgacatcaa
tttttgttatggagcactatcgatgacaaaaacatttctcgttttactgccgatataaag
gttaaaaaggatagtggctggttgggcagtgtcacaataactacttataccatggtggct
tttggaggcaaacgttcaagagagtcgcaagaaatcttggaagagatgcgtagtagagaa
tggggtcttattttgctggatgaagttcatgtcgttccagcaaatatgtttcgaaaagtt
ttgggagttatcaaagcacattgcaaattaggtttgaccgcaacgttggtcagagaagat
gaaaagattgaagatgttaattttttaattggtccaaagttgtatgaagcaaattggctt
gatttacagcaaaacggctatttggcaactgtgcaatgtgctgaagtatggtgtccaatg
actgctgaattctatagagaatatctcattcagaattctgccaaaagaaagctgttgtat
acgatgaatccaaacaagtttcagaccaccgactttttaattcgattccatgaaaataga
ggagacaagattatcgtattttcggataatatttttgctttgagaacgtatgcccgaaga
ctggctcgcccttttatttatggtccgacttcccaagccgaaagaatgagaatattttac
cagtttcaaaataatcccgcattgggaactatatttatttctaaagtaggagacacgagt
atagatttgcccgaagccaatgtcattattcagatatcttcacattatggatctcgaaga
caagaagcacagcggctaggtagaattttaaggccgaagcctcgaagcggccagcatttc
aatgcttatttttattcactagtgagcacggacactcaagaaatgtattattcatccaag
agacaacaatttttaattgagcaaggctatagctttcaagttattactcatttggaaggg
atgcaagaagaaagacatcatttggcgtattatcggaaggaggagcagttgagtctatta
gcggctgtgttggctgctgatgaaaaagaaacggaagaagagtttgttgaagattcagat
ccgagtggagatgttgccagaattctttcaaaggatggacggcagttgacgaaaagaacg
aatcggtcacttagaaaattaagtggagcagatggtttagtctatcgggagtatgatact
gcgcagacgaaaaatgtttcttctatatttgaacgaaaagtaatccatcatcctctgttt
aggaagagattatcaaagaaatga
DBGET
integrated database retrieval system
