Galdieria sulphuraria: Gasu_20610
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Entry
Gasu_20610 CDS
T02926
Name
(RefSeq) nucleoporin family protein
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Gasu_20610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_20610
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_20610
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Gasu_20610
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Gasu_20610
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup96
Nup98_GLEBS
Nup84_Nup100
Pus10_C
Motif
Other DBs
NCBI-GeneID:
17089319
NCBI-ProteinID:
XP_005707119
UniProt:
M2Y444
LinkDB
All DBs
Position
Unknown
AA seq
1907 aa
AA seq
DB search
MSLGGNFGKPLFGSQTTSAASFGSATPTFGGPSPFATSQSAPSFGSSPNVFQGGSVFGGG
GTPSSVTPQAGFGVPPSGAAPSSVPPSPFGQAQPAFGNAVTNVNPGQPAFSQHTPSFFGS
GSNFGNSQAVFASSTPFPASSFNQPSFAGGANSLGGFGSVGLGTQTTQSVPTFGNSSVAF
GAKSVQSTIPLSTSAFGNTLPNVSTSLGQGSAQGNTLKGTGNPKFQPIQEYDGGGVNVKY
MSISRMPDYQDKSFEELRYEDYLLGKKNSSSLSTFQPVGSGFGTSSINTGFGGPSSSLFA
SSPAISTPGFGASTSSLFGNTSTAFGSSQPSSVPGFGLGSSPFGQTSTGFGSSSSVFGVS
TPVPAFGSQSGAPFQAATTFGSSSSSSSLFSSNSSQKPFSGFGTSMPNQQLGSFGSTSIF
GNTSTAPAFGGSFGNTSAPSQPTLNLGSFGSSFGGGNRFGSASSSSASFGSSTFASSSPF
ANSFAFGADSSKQSGSLFGGGFATSPQTTSALFGSLPAASSGTSLFGSFSSSNPTTNILS
PMGQQSNTGGFAAPALGISGVGNSFSGLQSSSSGLFGSTPTFSAPFQQSSSFSMGSAPLF
GTQNSSILPNNLQGQQNWSFATSQSVAFNDMNTPYGKSPIFEAASLSLGKSSGTNNSLES
TNSSTSLSFSNGSSIARPSARSFARIHARSLRSSLSLSSPLFETKKPVSVFSPEHFTLVE
ADGSSPLLKSPAIGRSDMKRLIITPRSDVKGDISNGEWRNFASGWKSPPERKLSFPSSSP
TVQSSEELEKTNGLISSPTERKTTDLLEQSHVAKPTPLRSPGQYSGNLRSPSVYSSYREF
YEEHLSPEASRLESVSKMDERSSAPILTKPTYFTSPSIEKLRRMGDEDLSHVFHFTVGRR
DIGEIQWYGETDVRNLDLDRLVIIENREVTVYPNESEKPEVGIGLNKPAKVSLHKVWKMD
KKTGQPLKDVASVTNFTAKLKSHCEKQGLTFLGYDATQGTWSFEVPHFSRYGLPDSEDES
SEEEVVLESSLGHTSASLNLVFDKEIERIHEDEAEDEFPTVERMNIKESVDEKVGTSKES
QMDLNTFIHSKDGKKWTSSRMLLSSRKNPFKSNIFSAELGKTPEQQFFSSNSKMEESQPN
KQHFDLRNVIQKSPSSMKTSPEQVPGWLNAESFKDEIEEPMQKGSTKNRKFTRRFLELCF
RVSLNNSFLYTETEMKGKPLSFLSRSFRASVGPGFQVAFPIPSFMESNRPFISPVFIHEQ
AEEWEHSFIQKTLRIHFSSWKLSFDTEEMNDSFVYRRPSFRFPFRHREVVMKTLQHLILE
AGFSGNQHFELVLRLLLVLFVQNIDLDQDTRTSHDIELLLFRRHLSGWLQNFACTWSQEE
RNPAQDQFLYIFHLLTRGEIEQAVKFCSETKNFRLACMVAKGMQLQDEGYRSSCLKIHRF
YCGHVPKDLDRIYALLSGDILHATENLSLSWYRTFGLHFWYGSGALVTDSDGLKCSLQSY
IDEWQSNEFVAPPVPPHIVITVPEHEQLEASKGLKSDSLIYDACYVLLCIAADLYPEHVQ
WMHLATPLAYGVVYDALDAHKPWLVCEILSSICATSYLEPKVIISFAIQLEMMHLYTWAF
YVLWSCEVFGNNNMFYLKNVFIHWFPWIIVEEVEGTDGKLSSDRFLREELGVPASWFEEA
ACIYSRYNFQFIEEVDHLCVLLHMEADEYPLFSCVHLANRAHQVVLGRAAPSVFVLDTSS
VQWRKLKKILSVLGAIDRDYPGMIRDYKNGGSILEGICSIIQGFRLSLEDLESLLKNMEL
FSSLVSNLGCSKQGDMTLELFITCIFSHVFRETWKQLMEDTDDSKFQRLASCLETLQYSS
HVPWSCKQFIHNFIETYRSSGISFTRELSTRSYFQLFDLWFPRKLVE
NT seq
5724 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttggggggaactttggaaaaccgttatttggttcacagactactagtgctgct
tcttttggaagtgcaactccaacttttggaggtcctagcccatttgctacttctcagagc
gctccttcgttcggttcgagtcccaacgttttccagggtggttctgtcttcggtggtggc
ggtactccaagtagtgtgacgccgcaagcaggatttggagtaccaccttcaggagcagct
ccctcttcagttcctccatcaccgtttggacaggcacagcccgcctttggcaacgcagtt
acgaatgtcaatcccggacaacctgcttttagtcaacataccccttcgtttttcggatct
ggatcgaattttggtaattctcaagctgtctttgcttcatcgactcctttcccagcaagt
agttttaatcaaccctcttttgcaggaggcgccaactccttgggaggcttcggttctgta
ggcttaggtacacaaacaactcaaagtgtaccgacattcggtaacagttctgttgcattc
ggagcaaagagtgttcagagcactattccgctctcaactagcgcttttggcaacaccctt
cctaacgtctctacgagtctcggtcagggttccgcacaaggaaatactttgaaagggaca
ggcaaccctaagtttcaacctatacaagaatatgatggtggtggagtgaacgtaaagtat
atgtctatttcaagaatgccagattatcaagataaatcctttgaagaactgcgctacgaa
gattatctattgggaaaaaagaatagttcttctctttcaacatttcaacctgttggaagt
ggttttggtacatcttctatcaatacagggtttggaggaccttcgagtagtctctttgct
tcctcgcctgccatatcaactccaggctttggcgcatctaccagttcgctcttcggcaat
acttctacagcgtttggttcttcgcaaccatcctcagtcccagggtttgggttgggttcg
tctcctttcggtcagacgtcaacaggatttggctcaagttcttcagtctttggtgtttcc
actccggttccagcttttggctcacaaagcggtgctccctttcaggcagcgacaactttt
ggatcaagctcttcttcatcgagtttatttagcagtaattccagtcaaaagcctttttct
ggatttggtacatctatgccaaaccaacagctcggtagttttggctctacttctatcttt
ggaaatacatcgactgcacccgcatttggaggctcatttggaaatacaagtgcgcctagt
caacctacacttaatcttggctcttttggttccagttttggtggtggaaacaggtttggc
tctgcttctagtagctcagcttcttttggttcttcaacttttgcttcttctagtccattt
gccaactcatttgcgtttggagcggattcatcgaagcaaagtggttcattgttcggtgga
ggatttgcgacatctccgcaaacaacctcagcattatttggaagtttaccagcagcttct
agcggtacatctcttttcggctcattttcttcaagtaatccaacaaccaatattctatct
ccaatgggacagcagtcgaacactggaggattcgcagcacctgctttgggtattagtggt
gttggaaactctttttcaggactacaaagttccagttcagggctctttggttcaacacca
actttttccgcacctttccaacaaagttcctcattttctatgggaagtgctcctttattt
ggaactcaaaactcaagcattttaccgaataatctacaggggcaacagaactggtcattt
gcaacttctcaaagtgttgctttcaatgatatgaataccccatatggaaagagtcctatc
tttgaagcagcctctttgtcacttggcaagtcttcaggcacgaacaactcgcttgaaagc
actaactcttcaaccagcctgtctttttcaaatggcagttccattgcaaggccttctgct
cgctcatttgctcgtattcatgctagaagtctacgttcatcgttgtctttgagttctcct
ttatttgaaacaaaaaaaccagtatctgtatttagtccggaacacttcaccttggtagaa
gcagatggcagtagtcctttgttaaagtcgccagccattggaagatcggatatgaaacgg
ttaattattaccccaagatcagatgtcaaaggagacatttcaaatggagagtggagaaat
tttgctagtggctggaagtcgcctcctgaaaggaagctttcgtttccttcgtcatcgcct
acggtacagtcttcagaggaacttgagaaaacaaatggattgatttcctctccaacagaa
cgtaaaaccacagatttgctagaacagagtcatgttgccaaacctactccattgcgatct
cctggacagtattcgggtaaccttagatctccttcagtgtattcgtcatatcgagaattt
tatgaagaacacttgtcaccggaggcctctaggttagagtctgtttcaaaaatggatgaa
aggagtagcgctcctattttgacaaaacctacctattttacttccccaagtatagaaaaa
cttcgcaggatgggagatgaggatcttagtcatgtattccactttactgtgggccgaaga
gacataggagaaattcaatggtatggcgaaacagacgtacgcaacttggatcttgaccgc
ctggttattattgaaaaccgtgaagtgactgtttatccgaatgaatcagaaaagcccgaa
gttggtattggcctgaataaacctgcaaaagtgagccttcacaaggtttggaaaatggat
aaaaagacaggacaaccactgaaggacgttgccagtgttaccaactttactgcgaagctg
aagtctcattgtgagaaacaaggtctaacattcttaggatatgacgctacccaaggcacg
tggtcttttgaagtccctcattttagcaggtatgggcttccagatagcgaagatgagtcg
agtgaagaggaagttgtacttgaaagcagtttggggcacacatctgcttccttgaacctt
gtatttgataaggaaatcgaacgaattcatgaagatgaagcagaagatgagtttccaact
gtggaacgaatgaacattaaggagtcagtggacgaaaaagtcggcacttctaaagagagt
cagatggatttgaacacgtttattcactcaaaagatggcaagaaatggacttcttctaga
atgcttttatcatcgagaaaaaatcctttcaagtcgaatatattttcggcagaattaggt
aaaacaccagaacagcagtttttttcctcaaatagtaagatggaagagagccaacccaat
aagcaacattttgacttgcgaaatgtgatacaaaagtctccatcttctatgaaaacttcc
ccagagcaagtgcctggttggttgaatgcggagtcatttaaagatgaaatagaagaaccc
atgcaaaagggctcaactaagaatcgcaaatttactcgacggtttttagagttgtgtttt
cgagtgtctttgaacaattcgttcctttacacagaaacagaaatgaaagggaagccactt
tcatttttgagtcgttcttttagagccagtgtaggcccaggctttcaagtcgcttttcca
attccaagttttatggaatctaatcgaccctttatttcacctgtttttattcatgagcaa
gctgaagagtgggaacattcatttattcaaaagacccttcggattcatttctcttcttgg
aaactgagctttgataccgaagaaatgaacgattcctttgtgtacagacgtcccagtttt
cgatttccctttaggcatcgtgaggttgtcatgaaaacactgcaacatcttattttagaa
gcaggttttagtggtaatcaacattttgagcttgtccttcgacttttgcttgttctcttt
gtccaaaatattgacctcgaccaggatactagaacatcacatgatattgagttgctttta
tttaggcgtcatctgtcaggttggttgcagaattttgcttgtacctggtcgcaagaggag
agaaatcctgctcaagatcaatttctttatatttttcacttgttaactagaggtgagatt
gaacaagctgtgaagttttgtagtgagacgaagaatttccgattggcatgtatggttgct
aagggtatgcagttgcaagatgaaggctatcgatcgagttgtttgaagattcatcgtttc
tattgtggacacgtaccgaaggatttggatcgtatttatgctttactaagtggggatatt
ttacatgctaccgagaatctttcgttatcttggtataggacttttgggttgcatttctgg
tatggctcaggggctttggtaactgattcggatggactaaagtgttctctacaatcatat
attgatgaatggcaaagtaatgaatttgttgctcctccagttccacctcatattgtgata
acagtacccgaacatgaacagttagaagcctcaaaaggtttgaaatcagacagtctcatt
tacgatgcttgctatgtattgttatgcattgccgcagatttgtatcccgaacatgtgcaa
tggatgcacctagccactccattagcatatggcgtagtttatgatgccttggatgctcat
aaaccttggctagtttgtgagattctgtcaagcatttgtgcgacatcgtatttggaaccc
aaggttatcatttcgtttgctattcaactggaaatgatgcatttgtatacttgggcattt
tacgtactgtggtcttgtgaagtctttggaaataataacatgttttatctgaaaaatgta
tttatccactggtttccttggattatagtggaagaagtagaaggaacggatggaaagcta
tcgtcagatagatttttacgtgaagaacttggtgtgcccgcttcttggtttgaagaagcg
gcatgtatttattctcgatacaactttcaatttatagaagaggttgatcatctttgcgtc
ttgctacatatggaagcagatgaatatcctctttttagttgtgttcatttagctaatcga
gcgcatcaagtcgtcttaggtcgagcagctccaagtgtgtttgtattggacaccagtagt
gttcagtggaggaaactcaaaaagatactaagtgtattaggtgccatagatagagattat
ccaggcatgatacgagactacaagaatggtggtagtattctggaaggaatatgttccatt
atacaaggatttcgtttatcacttgaagatttggaaagtttattgaaaaatatggaatta
ttttcatcgcttgtgagtaatcttggatgttcgaaacaaggagacatgactttggagctc
tttattacttgtatattctcacatgtttttcgagaaacatggaaacagctaatggaagat
acggatgactccaagtttcaaagacttgcgagttgtttggaaactctacagtattcttca
catgttccttggagctgcaaacaattcattcataactttatcgaaacatatcgttcctcc
ggcatttcttttacccgagaattgtcgacacgaagctattttcaattgtttgatttatgg
tttccacgaaagttggttgaatag
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integrated database retrieval system
