Galdieria sulphuraria: Gasu_20780
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Entry
Gasu_20780 CDS
T02926
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gasu_20780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_20780
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Gasu_20780
mRNA degradation factors
5'-3' decay
Decapping complex
Gasu_20780
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF7597
Motif
Other DBs
NCBI-GeneID:
17089336
NCBI-ProteinID:
XP_005707137
UniProt:
M2XKF2
LinkDB
All DBs
Position
Unknown
AA seq
649 aa
AA seq
DB search
MEKDNWVVDDHIHSEQALEEDSELDDVNNETFADAVDVDYAWEEEHRLVASQLEEEKRKQ
RQWYIGSQVEDKLRLLSLQPQTSQEMNRDTMHTPVGNKDPLYANDIWGTNLFQGNRNDAR
ELQRKTAWNVVDSRRRPNKVLFAQDLERSLLESSQRRTTQVPISRGFLEPTVSGERRDPV
IGKVFARQESTSFEKDSALTKKKPWETFSESKKFEDEYPSLKESFKTLDSSRKKGASFFQ
SSQSNNQFRQPRDISSGHRQKRTGYQKRSDSRHFVRRLYSKWMTCSEIELIAKMHIRQLE
TSSWPVEDFYCQAYRQKEQRRSEEQLKEYPYSRDTKKKTLRSGYFPHHSENNLKILERAL
GSIQGYNPNAPRRMVQVALESVSDSSLERDEAHVTDTPFHEDSRIAAQSVISLAFDILFD
LEDELSVYSSVAELEEHKTKMSRKLLNTFGITVDENLRDETRNIFSRICALPKGRKLLIR
CFSVLPRTYLTPLLNMILFSLGMILKRTSKAQLEEPSWQQFVESVMHFIEETDDISVLTE
WTHSFAVGHQENKNFLFVITTGSSLSLVVTLLFSACSLDSSRQPPLKMLLNRLCERLILS
VEEMFKHVEHSIVWQLVALLDGFVDTMLREKLRMIIKKLIEEQRITLST
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaggacaactgggtggtggatgatcatatccactcggaacaagcactagaggaa
gactccgagttagacgacgtcaataatgaaacttttgctgatgcagtggacgtggactat
gcttgggaagaagaacatcggttggtagcttcccagttggaagaggaaaagaggaaacag
cgacaatggtacatcggttctcaagtagaagataagcttcgcctcctgtctttacaacca
cagacttctcaagaaatgaaccgtgatactatgcacactccagttggaaacaaggaccca
ctctatgccaacgatatttggggtacaaatctttttcaaggcaacagaaatgatgcaagg
gaactacagcgaaaaacagcttggaatgtcgttgattcccgtaggagaccaaacaaagta
ttgtttgctcaagacttggaacggtctctactagagagtagccaaagaagaaccacacaa
gttccaatttcaagaggcttcctagaaccaacagtcagtggtgaaagaagagacccagta
attggtaaagtttttgcacgacaagaatcaacctcttttgaaaaggactcggctctcaca
aaaaagaaaccttgggaaactttttctgagagtaaaaagtttgaagacgaatatccttct
ttaaaagaatccttcaaaacacttgatagtagtaggaagaagggagcatcattctttcaa
tcttctcagtcgaacaaccagtttcgtcaacctagggatatctcgagtgggcatcgacaa
aaaagaacgggttatcagaagaggagtgattcccgtcattttgttagaaggttatattcc
aagtggatgacttgttctgaaattgagctcatagccaaaatgcatattcgtcagttggaa
acttcgagttggcctgtagaagacttttactgtcaagcatatcgccagaaagagcaaagg
agaagtgaagagcagttgaaagaatatccctattctcgagatacaaagaagaaaactttg
aggagtggatattttcctcatcattcagagaacaatcttaaaatattggaacgtgcactt
ggtagtattcaaggatataatccgaatgcaccccgaagaatggttcaggttgcacttgag
tctgtttcggatagttcattggaaagagacgaagcccatgtgacagatacaccttttcat
gaagactccagaatagcagcacaaagtgtcatatctttagcatttgacatattgtttgat
ttggaagatgaactgagcgtctattcatcagttgcagaattagaagaacataaaacaaaa
atgtccagaaaactgcttaatacatttggtattactgttgatgaaaatttacgtgacgaa
acgagaaatatttttagcagaatttgtgctttgccaaagggtcgaaaactattgattcga
tgtttttcggttcttcctcgtacttatctgacaccattgttaaacatgattctctttagt
ttgggtatgattttgaaacgaacaagcaaagcacagttggaagagcccagttggcagcaa
tttgtagagagcgtcatgcactttatcgaggagacggatgatatttctgtcctcactgaa
tggacgcactcttttgctgtaggacatcaagaaaacaaaaactttctttttgtgataact
acaggctcaagtctctcattggttgtgactttgttatttagtgcatgtagtttagactcc
tcacgtcaaccacctttgaaaatgcttttgaacagattatgtgaacgattgatattatca
gtggaagaaatgtttaagcatgtggaacattccatcgtatggcagttggttgcgttactg
gatggctttgtggacacaatgcttcgagaaaagttgcgaatgatcattaagaaactcatt
gaagagcaacgtattactttatctacatga
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