KEGG   Galdieria sulphuraria: Gasu_20780
Entry
Gasu_20780        CDS       T02926                                 
Name
(RefSeq) hypothetical protein
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Gasu_20780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gsl03019]
    Gasu_20780
Messenger RNA biogenesis [BR:gsl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     Gasu_20780
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     Gasu_20780
SSDB
Motif
Pfam: DUF7597
Other DBs
NCBI-GeneID: 17089336
NCBI-ProteinID: XP_005707137
UniProt: M2XKF2
LinkDB
Position
Unknown
AA seq 649 aa
MEKDNWVVDDHIHSEQALEEDSELDDVNNETFADAVDVDYAWEEEHRLVASQLEEEKRKQ
RQWYIGSQVEDKLRLLSLQPQTSQEMNRDTMHTPVGNKDPLYANDIWGTNLFQGNRNDAR
ELQRKTAWNVVDSRRRPNKVLFAQDLERSLLESSQRRTTQVPISRGFLEPTVSGERRDPV
IGKVFARQESTSFEKDSALTKKKPWETFSESKKFEDEYPSLKESFKTLDSSRKKGASFFQ
SSQSNNQFRQPRDISSGHRQKRTGYQKRSDSRHFVRRLYSKWMTCSEIELIAKMHIRQLE
TSSWPVEDFYCQAYRQKEQRRSEEQLKEYPYSRDTKKKTLRSGYFPHHSENNLKILERAL
GSIQGYNPNAPRRMVQVALESVSDSSLERDEAHVTDTPFHEDSRIAAQSVISLAFDILFD
LEDELSVYSSVAELEEHKTKMSRKLLNTFGITVDENLRDETRNIFSRICALPKGRKLLIR
CFSVLPRTYLTPLLNMILFSLGMILKRTSKAQLEEPSWQQFVESVMHFIEETDDISVLTE
WTHSFAVGHQENKNFLFVITTGSSLSLVVTLLFSACSLDSSRQPPLKMLLNRLCERLILS
VEEMFKHVEHSIVWQLVALLDGFVDTMLREKLRMIIKKLIEEQRITLST
NT seq 1950 nt   +upstreamnt  +downstreamnt
atggaaaaggacaactgggtggtggatgatcatatccactcggaacaagcactagaggaa
gactccgagttagacgacgtcaataatgaaacttttgctgatgcagtggacgtggactat
gcttgggaagaagaacatcggttggtagcttcccagttggaagaggaaaagaggaaacag
cgacaatggtacatcggttctcaagtagaagataagcttcgcctcctgtctttacaacca
cagacttctcaagaaatgaaccgtgatactatgcacactccagttggaaacaaggaccca
ctctatgccaacgatatttggggtacaaatctttttcaaggcaacagaaatgatgcaagg
gaactacagcgaaaaacagcttggaatgtcgttgattcccgtaggagaccaaacaaagta
ttgtttgctcaagacttggaacggtctctactagagagtagccaaagaagaaccacacaa
gttccaatttcaagaggcttcctagaaccaacagtcagtggtgaaagaagagacccagta
attggtaaagtttttgcacgacaagaatcaacctcttttgaaaaggactcggctctcaca
aaaaagaaaccttgggaaactttttctgagagtaaaaagtttgaagacgaatatccttct
ttaaaagaatccttcaaaacacttgatagtagtaggaagaagggagcatcattctttcaa
tcttctcagtcgaacaaccagtttcgtcaacctagggatatctcgagtgggcatcgacaa
aaaagaacgggttatcagaagaggagtgattcccgtcattttgttagaaggttatattcc
aagtggatgacttgttctgaaattgagctcatagccaaaatgcatattcgtcagttggaa
acttcgagttggcctgtagaagacttttactgtcaagcatatcgccagaaagagcaaagg
agaagtgaagagcagttgaaagaatatccctattctcgagatacaaagaagaaaactttg
aggagtggatattttcctcatcattcagagaacaatcttaaaatattggaacgtgcactt
ggtagtattcaaggatataatccgaatgcaccccgaagaatggttcaggttgcacttgag
tctgtttcggatagttcattggaaagagacgaagcccatgtgacagatacaccttttcat
gaagactccagaatagcagcacaaagtgtcatatctttagcatttgacatattgtttgat
ttggaagatgaactgagcgtctattcatcagttgcagaattagaagaacataaaacaaaa
atgtccagaaaactgcttaatacatttggtattactgttgatgaaaatttacgtgacgaa
acgagaaatatttttagcagaatttgtgctttgccaaagggtcgaaaactattgattcga
tgtttttcggttcttcctcgtacttatctgacaccattgttaaacatgattctctttagt
ttgggtatgattttgaaacgaacaagcaaagcacagttggaagagcccagttggcagcaa
tttgtagagagcgtcatgcactttatcgaggagacggatgatatttctgtcctcactgaa
tggacgcactcttttgctgtaggacatcaagaaaacaaaaactttctttttgtgataact
acaggctcaagtctctcattggttgtgactttgttatttagtgcatgtagtttagactcc
tcacgtcaaccacctttgaaaatgcttttgaacagattatgtgaacgattgatattatca
gtggaagaaatgtttaagcatgtggaacattccatcgtatggcagttggttgcgttactg
gatggctttgtggacacaatgcttcgagaaaagttgcgaatgatcattaagaaactcatt
gaagagcaacgtattactttatctacatga

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