Galdieria sulphuraria: Gasu_21090
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Entry
Gasu_21090 CDS
T02926
Name
(RefSeq) ATP-dependent RNA helicase DEAD
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsl03041
]
Gasu_21090
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_21090
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Gasu_21090
Spliceosome [BR:
gsl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
Gasu_21090
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
Pre-60S particles
Helicases
Gasu_21090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
17089367
NCBI-ProteinID:
XP_005707170
UniProt:
M2X2P1
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MDSSTDSFSSLEEHIIFIDDGTFGGNNNVEQLGRYEIETSKQRESIISEIGNFVEQTSHQ
TDQSIANLSAGPESKESIKKRRKDYEYSSERMQLMMGDSTFLQLGISRPLLVAIRQLGWE
VPTPIQDKVIPLALVGRDICASAVTGSGKTGAFAVPILEKLWRSASKVSLVRVIVILPTR
ELALQCKQVFTELSKNMDIDIELAIGGLAVRAEQDALQRCPDIVIGTPGRIIDHIRNTKG
FSVDDVEIVVLDEADRLLDLGFSEELEEIIRSCSPKRQTLLFSATMTTSVQQLALLSLKE
PANIVVDPLYEVSKTLEQEFVLISDGNNVNKRISYLLALCCRTYTQRVILFFSKRSVAHQ
IFIIFGMLGLSAVELHGNLSQMQRMEALNRFRKGQCEFLLCTDVASRGLDIFDVRTVINY
EMPNDIRTYVHRVGRTARAGAKGKAVTLVDETSHARRLLSVIQKRSKTTLKSRSITDSVL
DKYLEILFSKQGQIKEQLQKERHEKEIEMAEMEAKKAQNLIDHADEIYARPKRTWFRSSR
KPTTTSRKKQNRKKKGNN
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggactcatcgacggacagcttcagttctctcgaggaacacattatttttattgacgac
ggaactttcggtggaaacaataatgttgaacaattgggaagatatgaaattgaaacatcg
aagcaaagagagtctatcatatcagagattggcaactttgttgaacaaacctcacatcaa
acagaccagtcgattgcgaaccttagcgctgggccagagtctaaagagtctataaaaaag
cgtagaaaagactacgagtattcttcggaacgaatgcagttgatgatgggcgactccact
tttttgcaacttggtatttcgcgaccactccttgtggccatccgccagttgggatgggaa
gttcccactccaattcaagacaaagtcattcctttggcactagtaggccgtgatatttgt
gccagcgctgttactgggtctggaaagacgggagcctttgccgtccctattttggaaaaa
ctatggagaagcgcctctaaagtttctttggttcgtgtcattgtgatacttccaacaagg
gagcttgctttacagtgcaaacaagtgtttacagagcttagcaagaacatggatattgat
attgagttggctattggcggtttagctgtgagagcggaacaagatgccctgcagagatgt
ccagatattgtcattggaacacctggtcgcatcattgaccatataagaaatacaaagggt
ttcagtgttgatgatgttgaaattgtagttttggatgaggcggatagattgttagatctt
ggtttttctgaagagttggaggagattattcgaagttgttctcctaaacgtcaaaccttg
ctattcagtgcaactatgacgacaagtgtccaacaattggccttattgtcgttaaaagag
cctgcgaatattgtggtcgatcctttatacgaagtttccaagacattggaacaagaattt
gtattgatatccgacggcaacaatgtgaacaaaagaatctcttatttattagcattatgt
tgtaggacatatacacaaagagtcatattattcttttctaagagatctgttgcacatcaa
atatttattatttttggtatgcttggtctttctgctgtggagcttcatggaaacttgtca
caaatgcaacgaatggaggcattgaatcgatttcgcaaaggtcagtgtgagtttttgctt
tgcacagatgttgcttccagaggattggatatatttgatgttcgaacggttatcaattac
gagatgccaaatgacattcgaacgtatgtccatcgagttggtcgtacagccagagcagga
gcaaagggaaaggcagtaacgctagtggatgaaacgagccatgctcgtagattgctttct
gtcatccaaaaacgttccaagactacattaaagtctcgttctattactgacagtgtattg
gataagtatttagaaatactttttagtaagcaaggacaaattaaagaacagttacagaaa
gagcgacatgagaaagagatagagatggctgagatggaagcaaaaaaggcacaaaatttg
atcgatcatgccgatgaaatatatgcaagacccaagagaacctggtttcggtcatctaga
aagcctacaacaacatcaagaaaaaaacaaaatagaaagaaaaaaggaaataactaa
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