Galdieria sulphuraria: Gasu_21970
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Entry
Gasu_21970 CDS
T02926
Name
(RefSeq) ATP-dependent RNA helicase
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_21970
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Gasu_21970
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Gasu_21970
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_19
AAA_22
AAA_25
PhoH
UvrD-helicase
DEXQc_Suv3
AAA_11
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
17089249
NCBI-ProteinID:
XP_005707045
UniProt:
M2X2C0
LinkDB
All DBs
Position
Unknown
AA seq
2224 aa
AA seq
DB search
MSFPPKFRNYLLAQKGQPVSVEQLEQVADQRKSYFQRQQSPASSSSTAWSEQKETEIVDY
LLPLLSIIAAFSESQLDERLERPLVALLRCYEEFLHSGKKDWLQSREEAFQHWIADKLGW
VCDSQQAQNFLSLLDSLASDTKTLLIFRRGEEKCLSRQLERCFHRACQRRRWENYVKSSN
NEFLQLDQPKIPVATDEWLSCYPEWNSEFEQEILQKLEKIRKQVNKEENVSPIQEIYDRC
RECFRQMYSLNEQQQQKNVSLEEEEQKVLDDCMQSIFGVLTTSQSSEQLQEQLFDLVGDF
ELVSELLQRREELIRVYYPKEEDEYIQSASSLAESSNATNASSIRTQSMLSEQLEALSLQ
GENGYYANEPFLKMSLPKGSTRQSYVGYEEYWIPPTNNRIPDENHLLRISQEVDSCFLPV
FKDITFLNPIQSKVFHTAYHTNENLLICAPTGAGKTNVALLTVLHVLKDKLIHHQVTDGP
RIVYIAPMKALASEVTENFRRRLKCLEVVVEEMTGDMQLSYQEAKKTDMIVTTPEKWDIV
TRKGTDSSDDSSLHANLQLLIIDEIHLLHELRGVILEAVIARTLKMVERNQRMIRLVGLS
ATLPNYEDIAEFLRVNRDQGLYYFDASYRPVPLSLTFIGLSSRLPEEEGELQQQQLEKES
LTSLVNEKMPKKKTDAIQLRQEWMNKLCFEQLQKFLQRQQQVLVFVHSRHDTSRTARAFL
QYINKHGLSHLLGDTDEESTNPIKVGQFKSSDLREFVSSNVAIHHAGLLRSDRSYVEELF
RQGLLRVVICTATLAWGVNLPAHAVIIKGTQIYDASRGGFTELGLLDVMQIFGRAGRPQF
DTEGEAVMITTHQQLPFYLRLLTSQLPIESQLCHLSCLADHLNAEIVLGNISNVMQGVEW
LEYTYLATRMRKNPLAYGISWQELLYDPSLMTKKREMIIASAKILDEARMIRFDSLNEVF
YSTELGRIASHFYVCNGTVHKWNEMLRADFTDSEVIRALSMADEMETIKFRDDELPELLE
LSKKCPIRILGALENSKVVILLQSYISRLPIHTSALISDTQFIVQNAGRLAQALFEIVLG
RAWPSLSYTILQLCRSLQRRIWPFQHPLRQLAGDGERKKHSSNKHPHISAEICYKLEQLG
PSGEFSHLTELGVDELSSALRAPQAAKNVMRCISLVPQLYLEAEAFPLTSTVIQIQLSWK
PHFYWNDHLHGILESQERHPESWWLWVEDTETEQIYHSEQISVTKRLAQEYWKHPDKEPQ
TRNFSIAVYEPISPQYVIRACSAHWHSADTVVAISFYGMQLPRHETVYTNLLDLQPLHRS
CLFLGSHLEQVLYPNIRYFNPLQTQVFHVAYHTDENILFAAPTGSGKTAIAEFAMLRCMR
TTKERGIMGLPGLIVYIAPLKALVRERAQDWRKRFGDPSLGKVIVELTGDDSPANISTTL
KYADIICTTPEKWDSISRSWRRRKQVLEVTLYILDEVHLLGSERGPVLEMIVSRAKRLAL
KHNIPVRWIALSTALANPVDLASWLGVEDVGMFNFRPSVRPVPCEVHIMGVAGKNYSPRM
TAMNKPAYQAIRQYSPHKPVLIFVSSRRQTRRTALEMIRCAASDGNPHFFLKSDISKEFA
SIEDSSLKSTLEYGVGIHHGGLLENDRIVVEQLFASGKIHLLVSTATLAWGVNLPAHLVI
IKGTEYYDAKSKTYVDMPITDILQMMGRAGRPQYDEKCFAFILVHEPKKNFYKKFLYEPF
PVESNLLKQLEDPINAEVAGGWIRTAQDAVDFLTWSFFFRRLLCNPAYYHLQNVTAKDIS
EYASRLVQNILQRLEKANCITVFSSEEETGQVDNDVSQSPKRWLEPQVERQHQQIVNALQ
SSRTVNLSPIVASTFFGKVATFYYLSYKSVGWLAKVWTQGATFMTVLIWLTSCEEFSDIP
VRHNEDNINAALLQEIQQQISFLASNHNVIASASLYQETVSTLERIHQTGDMEDPHCKAL
LLFCAHLSRCSFSVVDYHTDLLTALEQAGRVLQAMIDIAIQRDDIATAITCIHLSQCLSQ
GCWPWEFTFLRVIKTHLPECEQWLVQQCGIKETGQDFYMHWKDRKASWLQSLEEKQRHTL
QRLYSTVPVVQMQALWDFGNHNILVKWNDKKQPRGLWIYQKRRANQETWYLILIDTTSGG
IGAFRRIRSSKKNINKMLYPENDLNGESSALLLLSANYRGVDQMWRWVDNKSQFLSSYQV
AWNE
NT seq
6675 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcctccaaagttccgaaactatttattagctcaaaaaggtcagcctgtttca
gtagaacaactggaacaagttgccgaccaacgtaagtcctatttccaaagacaacaatca
ccagcttccagtagtagtactgcttggagtgaacaaaaagaaactgagatagtagactat
ttattgccactattgtctataattgctgccttttcggaaagtcaactggacgagcgtttg
gaacgccctttggttgcattgttgcgttgctacgaagagtttttacatagtggaaaaaaa
gattggttgcaatcaagagaggaagctttccagcattggattgcggacaagttgggttgg
gtttgtgatagtcaacaagcgcagaatttcttatctctattggactcgctagcaagtgat
accaaaaccttgctgatttttcgacgaggagaagaaaaatgtctatcgagacaattagaa
cgctgttttcatcgagcttgccaaagacgacgatgggaaaactatgtcaagtcatcaaat
aatgaatttcttcaattggatcaaccaaaaataccggttgcgacagacgaatggttgagt
tgttatccggagtggaacagcgaatttgagcaggaaatattgcaaaaattggaaaagata
cgaaagcaagtcaacaaggaagaaaatgtgtcccctatacaagagatttatgacagatgt
agagaatgttttcgacaaatgtattctttaaacgagcaacaacaacaaaagaatgtatca
ttagaagaagaagaacaaaaggttttagatgactgtatgcaatctatttttggtgtcctt
acgacatctcaatcttcagaacaactgcaggaacaactttttgatctggttggagatttt
gaattggtttcggaacttttacagcgtcgagaagagttgattcgtgtttattatcctaaa
gaagaagatgaatatatacaaagtgcttcttctttggctgaaagttcgaatgcgacaaat
gcttcttccattcgtactcagtctatgttatctgaacagttggaagctttatctcttcaa
ggcgagaatggctactatgcaaatgaaccattcctaaaaatgagtttgccaaaaggaagt
acgcgtcaaagctatgtaggttatgaagaatattggataccaccaacaaataatagaata
ccggatgaaaaccatcttttgagaatatcacaagaagtagattcctgttttcttccagtt
ttcaaagatattacctttttgaatcctattcaatccaaggtttttcatactgcttatcat
accaatgagaaccttttgatttgtgctccaacgggggcaggtaaaaccaacgttgcttta
ttaactgttcttcatgtattgaaagataaattaattcatcatcaagtaactgatggacct
cgaatcgtctatatagcccccatgaaagctttggcttctgaagttaccgagaattttagg
cgacgtttaaagtgtttggaagttgttgtagaagaaatgactggagatatgcaactgagt
tatcaagaagcgaaaaagacggacatgattgttactactcctgagaaatgggatattgtt
actcgcaaaggtaccgatagttcagatgattcaagtctccatgcaaatttacaacttttg
attatcgatgaaattcacttgttacatgaacttcgtggggttattttagaagcagtcatt
gcaagaaccttgaaaatggtggagagaaatcaaagaatgataagactcgttggtttatct
gcaacattacccaactatgaagatattgctgaatttttaagggtgaatagagaccaaggt
ctttattattttgatgcatcttatagacctgttcctttatctttaacatttattggtttg
agttctcgtctacccgaagaggaaggagaactacaacaacaacaactggaaaaggaaagt
ttgaccagtcttgtgaacgaaaagatgccaaaaaagaagaccgatgctatacaattgcgt
caagaatggatgaataagctttgttttgaacaattacaaaaatttctacaacgtcaacaa
caagtcctggtatttgttcattcccgacatgatacgtcaaggacagcaagagcttttctt
cagtatatcaacaaacatggtctttctcatttattaggtgatacagatgaggagtccacc
aacccaataaaagtgggacagttcaagtcttccgatttgcgagagtttgtttcgtcaaac
gttgccatccatcatgctggattgttgcgttctgatcgttcctatgttgaagaactgttt
cgacagggcttattaagagttgtcatatgtactgcaactttagcatggggagtcaatctt
ccagcacatgccgtaatcattaaaggaacacaaatctatgatgcttctcgtggtggtttt
actgaattgggtttgttggatgttatgcaaatatttggacgagcaggcagacctcagttt
gatacggaaggagaggcggtaatgattaccacacatcagcaattacccttttatttaaga
ttgcttactagccagttgcccattgaaagccaattatgtcatttgagttgtttagcagac
catttgaatgcagagattgtacttggaaacatttccaatgtgatgcagggagtggagtgg
ttagagtacacctatcttgcaactcgaatgcgtaagaaccccttagcttatggaatctca
tggcaagaattgttgtatgatcccagtttgatgaccaaaaagcgtgaaatgatcatcgca
agtgccaaaatattagatgaagccagaatgattcgttttgactccttaaatgaggtcttt
tacagtaccgaactgggaaggattgcttcccacttttatgtttgtaatggaacggttcat
aaatggaacgaaatgttgagagcagattttacagactcggaagtcattcgagctttgagt
atggctgatgaaatggagactataaaatttcgagatgatgaattaccagagttgctagaa
ttatctaaaaagtgtcctattcgtattcttggtgcattggaaaactccaaagtggtgata
cttttacaaagttatatttcgaggttacccattcacacatcagctttgatatccgatact
caatttattgtacaaaacgccggtcgattggcacaagctttatttgaaatagttttagga
agagcatggccaagtctttcttatacaatattgcaattgtgtcgttcattacaacgtagg
atatggccatttcaacatccacttcgtcaactggctggagatggagaacgcaagaaacat
tcttccaacaaacatcctcacatatctgctgaaatttgttacaagttggaacaattaggt
cctagtggagaattttctcacttaacggaacttggtgtcgatgagttatctagtgcactt
cgagcacctcaagcagctaaaaatgtcatgcgttgtatatctttggtaccacaactttat
ttagaagcagaagcatttccattgacatccactgtcattcaaatacaattatcctggaaa
ccacatttttattggaacgatcatttacatggtatattagaaagtcaagaaagacatcca
gaaagttggtggttgtgggtagaagatacggaaactgaacaaatttatcattcggaacaa
atttcagtaaccaaacgattagcgcaagagtattggaagcatccagataaggaaccacaa
accaggaatttttccattgctgtttatgaaccgatttctccgcaatatgtgatacgtgca
tgttctgcccattggcacagcgcagatactgtcgttgctatttccttttatggaatgcag
ttgcctcgacatgaaactgtgtatacgaatttgctggatttacaacctttgcatcgctcc
tgtttgtttttgggtagtcatttggaacaagttttgtatcccaatattcgttattttaat
ccattgcaaactcaagtatttcatgttgcttatcacacggatgaaaatatattgtttgct
gccccaactggttcaggtaaaactgctattgcggagtttgctatgttacgttgtatgagg
actacaaaagaacgaggaatcatgggacttcctggtcttatcgtgtacattgcacctttg
aaagctttggtacgagaaagagcgcaggattggagaaaacgtttcggtgatcccagttta
ggtaaagttattgtcgagttgactggagatgattctcctgctaatatttcaacgacattg
aaatatgcggatatcatttgtactacacctgaaaagtgggattccatatctcgaagttgg
aggagaaggaaacaagtacttgaagtgacattgtatatattggatgaagtgcatttattg
ggatctgagaggggtcccgtattggaaatgatagtgtcacgtgcgaagagattggcactg
aagcacaacattcctgtgagatggattgctttatccacagcattggctaatcctgttgac
ctggctagttggcttggagtagaagacgtaggaatgttcaattttcgtccgagtgttcgt
cctgtaccttgtgaagtacatattatgggtgttgcaggtaaaaattatagtccacgaatg
actgccatgaacaaaccagcatatcaagccattagacaatattcacctcacaagcctgtt
cttatctttgtatcttctcgaagacaaacgagaaggacagctttagaaatgatccgatgt
gcagcatctgatggaaatcctcatttctttctcaaatcagatatctctaaagaatttgcc
tccattgaagactccagtttgaagagtactttggaatatggagtaggtattcatcatgga
ggcttattagaaaatgaccgcatagtagttgaacagctttttgcttccggtaaaattcat
ttgttggttagtactgcaactttggcttggggtgtcaatcttcctgcacatttggttatt
atcaaaggaactgaatattatgatgcgaaatcgaaaacttatgtagatatgccaatcaca
gatattcttcaaatgatgggtcgtgctggtcgtccacaatacgatgaaaaatgttttgct
tttattttagttcatgaaccgaagaaaaacttttataagaaatttttatacgagccattt
cccgtggagtccaatttattgaaacaattggaagatcctatcaatgctgaagtagctggt
ggttggattcgaacagcacaagacgctgtggattttcttacttggagtttcttttttcgg
cgattattgtgcaatcctgcttattatcatttgcaaaacgtaactgcgaaagatatatcg
gaatatgcatctcgtctagtacaaaatattttacaacgacttgaaaaggcaaactgtatt
actgtcttttcatcagaagaagaaacgggtcaagtggataacgatgtatcacaatcaccc
aaacgttggttggaaccacaagtggaaagacaacatcaacaaattgtgaatgctttacaa
tccagtcgtaccgtcaatctctcgccgattgttgcatccacattttttggaaaggttgca
actttttattacttgtcttataaaagtgttggatggttggccaaagtatggacccaagga
gccacctttatgaccgttcttatatggttaacaagttgtgaagaattttccgatattcct
gtgagacacaatgaagataacatcaatgccgcattgttacaagaaattcaacaacaaatt
tcttttttagcatccaatcataacgttatagcttctgcttctttatatcaagaaactgtg
tctacattggaaagaattcatcaaacgggtgatatggaagatcctcattgtaaagcgctg
ttattattttgtgctcatttgagtcgttgttctttttcggttgttgattatcataccgat
ctattgaccgcattggaacaagctggacgagttttacaagcaatgattgatattgctata
caacgcgatgacattgccactgctattacttgtattcatttgagtcaatgtttatctcaa
ggttgttggccttgggagtttacatttttaagagtgattaaaacacatttacctgaatgc
gaacagtggttggtacaacagtgtgggataaaggaaacaggtcaggacttttatatgcat
tggaaagatagaaaagcttcttggttacagtcattggaagaaaaacaacgacatacatta
caaagattatactccactgtacccgttgtacaaatgcaagcgctatgggactttggtaac
cataacattttagtgaaatggaatgataaaaagcaacctcgtggtctttggatatatcaa
aaaaggagagctaatcaagaaacttggtatttaatactgatagacacaactagtggcgga
ataggtgcatttcgaagaattcgatcatccaaaaaaaatataaataagatgctataccca
gagaatgatttgaatggagagtcctcagctcttcttttactgtcagcaaattatcgagga
gtcgatcaaatgtggcgttgggtggacaacaagtctcaatttctttccagttatcaagtt
gcatggaatgaataa
DBGET
integrated database retrieval system
