Galdieria sulphuraria: Gasu_24920
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Entry
Gasu_24920 CDS
T02926
Name
(RefSeq) nucleotide excision repair complex subunit XPC-like protein isoform 1
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Gasu_24920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_24920
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
Gasu_24920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
BHD_1
Rad4
BHD_2
Transglut_core
Motif
Other DBs
NCBI-GeneID:
17088863
NCBI-ProteinID:
XP_005706630
UniProt:
M2X168
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MTQKSNRKHSNKANNQNTNDNCKDSILQVEQTYEEYEDIEWSEASVPVDNAQEETTAQES
RTSSTTLIECSKEQSATSSKVKSPYSKEDRLQALRMHKTHLLILLSSLMKLNELASDPLV
IGSCLSVIPRDCLLSEEETQATVEDWKEKCRRLVLFCCHFVGQQKRILNCKDYGNYMFWQ
PFHIQQWLESPRPVASLFVVFVCAIFRGLGMRCRLVQSLIPFQRQPWWTRDEVFRDARKR
NSTVQHSNTNNLSCCDDSFWWLFAPWMMELALPGSLYCKEMSCHSLESLPCIYWLEVYSP
LLQRWVHIDPFHLLIDEPSWVESSYKKWKWHPFRQRMIYPIYITAIENVRDDVTIIRDVT
LRYISLSIIRNQRLKDEFWEKTMEAFSHTQYQRNIIQSDVCIIHEEREWEYWNNMEPIPN
QIQKLKGHPQYVLEMHLKKYEAIYPKDRILGYCGEYPVYPRSNVHILHTRDGWIREMRQV
LKDQVAWKRVKTKRNANHEEGTELFGIWQTEPFTPPSVENGKVPKNKRGQVDLWSKSHLP
QGCIHVRYSNAAMIAKRLSLDYAPAMIGFDIHQGRSVPILDGIVIAKEYQEVIEDACRQD
CQHKEDEQMKRRYERALQLWKACIRHVQSQLRVSHLEIEGNVTILL
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacccaaaagtccaacagaaagcattcgaacaaagccaataaccagaatactaatgat
aattgtaaagattctatactacaagtggaacagacatatgaagaatatgaagacatagaa
tggtcggaagcttctgttcctgttgacaatgctcaggaagaaaccactgcacaggagagt
agaacgagttcgaccacgcttatagaatgttctaaagaacagtcagccacaagttccaaa
gtaaaaagcccatatagcaaagaagatagattacaggcactacgaatgcacaagacccat
ctactgatactgcttagttctttgatgaaactgaacgaattggctagtgatcctttggtg
ataggaagttgtctctcagtgattccgagagactgtcttttgagtgaagaagaaactcaa
gcaactgtggaggattggaaagaaaagtgtcgtcgtcttgttctattttgttgtcatttt
gttggacaacaaaaaagaatactcaactgcaaggattatggcaactatatgttttggcaa
ccttttcatattcagcagtggttagagtcaccaagacctgtggcttccctatttgttgtt
tttgtatgcgcgatatttcgtggtttaggaatgcgatgtcgtttggttcagagtttgata
ccgtttcaaagacagccttggtggacaagagatgaagtttttagagatgcgagaaagagg
aattcaactgttcagcattccaataccaacaacttgtcttgttgtgatgattccttttgg
tggttatttgcaccgtggatgatggagttggctttgcctggtagtttgtattgcaaggaa
atgtcttgtcattctttagagtcacttccttgtatatattggttggaagtatattctccc
ctattacaacgttgggtacatatcgatccttttcatttattgatagatgaaccaagttgg
gtagagtccagttataagaaatggaaatggcatccctttagacagcgaatgatatatcca
atatatattactgcgatagaaaatgtacgagatgatgtgaccatcataagggatgtaact
cttcgatatatttctctttccatcataagaaatcaacgactgaaagatgaattttgggag
aagactatggaagctttcagtcatactcaatatcaacgaaacattattcaatcagatgta
tgtatcatacatgaagaacgagaatgggaatattggaataacatggaacccattcctaac
caaatacaaaagttaaaaggtcatcctcaatatgttttagaaatgcacctaaagaaatat
gaagctatttatcccaaagatagaatattgggttattgtggagaatatccagtatatcct
cgttcaaatgttcatattttacatacgagagatggttggatacgtgagatgagacaagtg
ttgaaggatcaagttgcttggaaaagagtcaagacaaaaagaaatgcaaatcatgaagaa
ggaaccgaattatttggaatatggcaaactgagccttttactcctccatctgtagagaat
ggaaaagtgcctaagaataaaagaggacaggtagacttgtggagtaaaagtcatttacca
caaggttgcatacatgtgagatattccaatgctgccatgatagccaaacgcctttcttta
gattatgcaccagctatgattggttttgatattcatcaaggtcgttctgttcctatattg
gatgggattgtgattgcaaaagaatatcaagaagttatagaggatgcttgtagacaagat
tgccaacacaaggaagatgaacaaatgaaacgaagatatgaacgagcacttcagttatgg
aaggcttgtattcgtcatgtccaaagtcaacttcgagtaagtcatttggaaatagaagga
aatgtaaccatattgctttga
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