Galdieria sulphuraria: Gasu_26500
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Entry
Gasu_26500 CDS
T02926
Name
(RefSeq) DNA mismatch repair protein MutS isoform 1
KO
K08737
DNA mismatch repair protein MSH6
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Gasu_26500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_26500
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Gasu_26500
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
Motif
Other DBs
NCBI-GeneID:
17088823
NCBI-ProteinID:
XP_005706585
UniProt:
M2X125
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MKSQSTLLSFFETKPKSIYEEDNNKLHDAIKRTRDSNDKTHTEIVKKGARLQAPFVPIEE
ATVEKQAAVSVEREFFGHKLDLKQRQEKRRSLGQSVEEPANQKTGEEKWSETNRWATDIR
DEQHRLPTDVDYDPSTLYIPPEAFRQLSPFQKQFWELKRKHYDIVLFFKKGKFYELYDCD
ADIGHSVLGLNYTAGGRVEMRCVGVPETSFARYASKLVDNGYKVGRVEQVETTTAAAQRR
RSSDSVDSKIAVCQRSLVRIMTKGSLTVDELNGDPSSHFLLCIHQCIRSEKIGFFYLDVS
AGYSTVGEMKHDAGLADLEAILLSVQPVEIIAINCQQKGPLSELLKYFTSTTNCLLVHQH
SSYGYSQRGANFPTQLEEFLLRHSTASIALFGCLEYLKSLYISVEVLRFDSTVIWDKCCT
NEHISKNLSNEVNWEDRCLGNLSLIGSTIFNLEIVTSRPNKIGGHTLLSFIDHTATAGGK
RLIKQWICTPLICRSQIERRLDSIEIILRKDSKSNILDQVRKQLSQFPDIERQIVKIQNM
AYCSHQIVMFDDSEKRKVLEFLKFLKCLDHAVEFLKKQLPVILFPEFDSFISFIQNFDNN
LLHKCRNVLDDLFNEFPDLDRTENGEMNFSEDSTFKNEIEGIELRLQRILEDFREQMNID
IQWFHRFREAYQLEFSQSALEKTNIPDDFVLMSQTSDKKRFWTPEIKQLVKKRNELLEAH
TISESSKFKKILQKFDDSAILWRDLAKIISELDALFSLARTSRSSTGMMCRPEIIDSDIP
RLVVEELRHPCLADMGDLYASGSCRTFIPVSLNLGGVEGTSFVIRGPNMGGKSTLLREIC
LGVILAQCGCYVPAKKFQFTLFDKIFTRMGASDAIGRGQSTFLLEVQEAAAILNTATKSS
LVVIDELGRGTSTYDGYAIAKAVLNDISTRIGCLCFFSTHYHNLIHEKLPSNIRFFEMQA
EVDEEKKDVTFLYTLKQTSTSFVSSRGVYCAKMANLPGEILIRAEDPKVRALLNGMDQSY
DEMEAEFLKVFHS
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctcaatcaaccttattatcgttttttgaaacgaaacccaaaagtatttatgaa
gaagataataataagcttcatgatgctatcaagagaacaagagattcaaatgataaaacg
catactgagatagtgaaaaaaggtgcacgactgcaagctccctttgttccgatagaagaa
gcaacagttgaaaagcaagctgctgtatctgttgaacgagagttttttggacacaagtta
gacctgaagcaaagacaagagaaaaggagaagcttgggtcagtctgtcgaagaacctgca
aatcagaagacaggggaggaaaagtggtcagaaacgaaccgctgggctacagatattcgt
gatgagcagcatcgtttgcctactgatgtagattatgatccttctactctgtatattcct
ccggaagcatttcgacagctttcacctttccagaaacagttttgggagttgaaaaggaaa
cactatgatattgtactatttttcaaaaagggaaagttttatgagctttacgactgtgat
gccgatataggacatagcgtgctcggacttaactatactgcagggggacgtgtcgaaatg
cgttgtgtaggtgttccagaaacgagtttcgcgagatatgcttcaaagcttgtagataat
gggtataaggttggaagggttgagcaggttgaaacaacaactgcagcagcacagcgaaga
cgttcttccgattcggttgattccaaaattgccgtttgtcaacgttcacttgttagaatt
atgactaagggctcgttgactgtcgatgagcttaacggtgacccttcttcccattttcta
ctttgcattcatcagtgcataaggtcggagaagattggattcttttatttggatgtttct
gcgggatacagtactgttggagaaatgaaacatgatgcaggactggcggatctggaagct
attttactttcagtgcaacctgtagaaataatcgcaatcaattgtcaacaaaaaggacct
ctttcagaactcttaaagtacttcacgagtactacaaactgcttactggtccatcaacat
tcttcttatggttattctcagagaggagcaaatttcccgacacagcttgaggagtttctt
ttacgacattccacagcttcaatagcattgtttggatgtcttgaatatttaaaaagtttg
tatatatcggtggaagttctgcgttttgattctacggtgatatgggataaatgctgtacc
aatgagcatatttcaaagaacctttcaaatgaagtaaattgggaagaccgttgcttagga
aatttaagtctaataggttctactatttttaaccttgaaattgttacctcacggccgaac
aaaataggaggtcatactctgctgtcattcatcgatcacacagcgactgcgggtggaaag
cggctaatcaaacaatggatatgtacacctctaatatgcaggtcacaaattgagcgacga
ttggattcgatcgagataattttgaggaaagattctaaaagcaatattttagatcaagta
cggaaacaattgagtcagtttccagatattgaacgacaaatagtcaaaattcaaaatatg
gcatattgtagtcaccagattgtgatgtttgacgattctgaaaaacgaaaagtcctggaa
tttttaaagtttcttaaatgtcttgatcatgccgttgagtttttgaagaaacagttacca
gtcatattgtttcctgaatttgactcttttatttcatttatacaaaattttgataataat
cttcttcataagtgtcgtaacgttctggatgatctattcaatgagtttcctgatctggac
aggaccgaaaatggtgaaatgaatttctcagaagattcgacattcaagaacgaaattgaa
ggcatagagttgcgtttacaacgtattttggaggattttcgagagcagatgaatatagac
atacagtggtttcatcggtttcgagaagcatatcaactggagttctcacagtcagctctg
gaaaagacaaatattccggatgactttgttcttatgtcgcagacatctgacaagaaacgt
ttctggactcccgaaatcaaacagctagtgaagaagagaaatgagttacttgaggcacac
actatttctgagtcttccaagtttaagaaaattcttcaaaagtttgatgactctgctata
ctttggagagatttggccaaaataatttcggaactggatgcattgttttcactggctcga
acatctcgctcttcaacaggtatgatgtgcagacctgagattattgattcagacatacca
cgtcttgtggttgaagaattacgacatccctgcctagctgatatgggagatctttatgcc
tctggttcttgtcgaacttttattccagtttctttgaatttgggaggagtcgaaggaact
tcctttgtaataagaggccctaatatgggaggtaaatctacgcttttgagggaaatttgt
cttggtgttattctagcacaatgtggctgttatgttcctgcaaagaaatttcaatttact
ctatttgataagatattcacccgaatgggagcgtctgatgctattggccgtggtcaaagt
acctttttattagaagttcaggaggctgccgcaatcctaaacaccgcaacgaaatcatct
cttgttgttatcgatgaacttggccgaggaacctctacctatgatggctatgctatcgct
aaagcggttttaaacgacatttcgactcgcataggttgtctttgctttttttctactcat
tatcataatctcattcatgaaaaattgccaagtaatattcgattctttgaaatgcaggca
gaggttgatgaggaaaagaaggacgtaacatttctttacactttgaagcaaacttcaaca
agtttcgtgtcgagcagaggggtttattgtgcaaagatggccaatcttcctggggagatt
ttgatacgtgcggaagacccaaaggtcagggccttgttgaatggaatggatcaatcttat
gatgaaatggaggcggaatttcttaaagtatttcactcataa
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