Galdieria sulphuraria: Gasu_27540
Help
Entry
Gasu_27540 CDS
T02926
Name
(RefSeq) clathrin, heavy polypeptide
KO
K04646
clathrin heavy chain
Organism
gsl
Galdieria sulphuraria
Pathway
gsl04142
Lysosome
gsl04144
Endocytosis
gsl05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Gasu_27540
04142 Lysosome
Gasu_27540
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
Gasu_27540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsl04131
]
Gasu_27540
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsl04147
]
Gasu_27540
Membrane trafficking [BR:
gsl04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
Gasu_27540
Exosome [BR:
gsl04147
]
Exosomal proteins
Proteins found in most exosomes
Gasu_27540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_PEP5_VPS11
TPR_IF140-IFT172
Motif
Other DBs
NCBI-GeneID:
17088732
NCBI-ProteinID:
XP_005706491
UniProt:
M2W2Q0
LinkDB
All DBs
Position
Unknown
AA seq
1715 aa
AA seq
DB search
MAQPVQLEEILSLTSLGINTESISFSTVTMESDKYLCVREVSGGSQNQVAIIDIQDPANI
IRRPITADSVLMNPATKVLALKAGVQLQLFDIGKKSKVKSYVMEEEVLFWKWLSQKTLGL
VTSHSVYHWDCSDTSSEPVKMYDRHSTLMNAQIINYRADEDEKWLVLIGLQQEGDKVVGR
MQLYSVERRVSQAIEGHAAAFCKFQINSKDPGTKLFVFATKTSNASKFHVIEIGQDKKPS
DAPRFSKCVTDIYYPPEATEKDFPVALQVSSMYSFAYLVTRLGYVQVYDLESGRCLYMNR
ITESTIFLTAVHTNTGGFVGLNRRGQLLGFSVEPNNFVPYILDSLGDVQLAIKVASRNKL
PGAEDLYERYFDQLFNAGNYKEAARVAAESPGGILRTPETIAKFKSVPAAQGQPSALLLY
FQALLERGALNRFESAELGGQVIQFGRTQLLERWMNEDKITCSEELGDVVRSSDPKLALQ
IYLKAEAHGKVIEAFLENGAYDKILVYAKRVGLSVEPMELIQTAVNYSPKSALDLAQYFL
KQFQEGGGKPLDHAAIAEMFYSRGLIQEGTSYLLDALKDDRAEDAELQTRLLEVNLLSAP
PVADAIMAQNIFHYYDRRKIANLCERQGLFQRALENYNDLDDIKRVMANTHALSPEFLIG
YFSNLSPEDSLECLKELLRVNPRGNSQLCAQIASNYADQLGPQRVISLFEERGLTEGVFY
FLGGIVNYSEDPDVHFKYIETAIKLGQFHEAERVTRESNFYDPEKVKDFLMDMRPKDPRP
LINVCDRFGYIPELIRYMVKNNQLKFIEGYVQRVNPAKTPQVIGALIDLDVEEYFIKDLL
QSVKNLVPVDELVNEVERRGRLKILLQFLEAKVADGSTESSVHSALAKVYVDCNINPEHF
LETNSYYDPLVVGPYCEKRDPYFAYIAYRKGQCDDELLSVTNRNGLFKEQARYVVEREDS
DLWARVLSPDNENRRQFIDQAVNTALPEQKNPERISVAVKAFMTADLPHELIELLEKLVL
RGSGSFANNRNLQNLLILTAIKSDTSRVMDYVRKLDNFDGMDIAPVAIDAGLYEEAFEIY
CKFKQPEAAVDVLLEQIGDLNRATEFAEKVNSPMVWSKLGIARLEHGDVVGGVNALLRAK
DPAPYQKVVEAARATDGDQSAFEAVIKFLHMARTKVKDLVFVDTELVYAFCVCDRLNEME
EFVAGANSANLEEVGDRCFDEQRFNAAKILFSKIGNFAKLAPVLVCLGDYSGAVEAAKKA
DRLKTWKLVCYACLEAEELHHAQVCGLHIIVEPEELDEILQFYQNLGYFEAAIELLEGGV
SLERAHAGIFTELGILYSKYREESLMDHLKMWWQRCSIPRLIRATEAASQWPELCFLYIR
YDELDNAANIMMNHSPSCWSHSGFTEVMSKVTNTEILYRSVEFYLDEHPNLLNELLSLIS
TKIDSGRVVYIVRRAGEQEMGPLGYLPIVKPFLMKVQENNIATVNEALHDIFVDEEDIAS
LRQSIQKYDNFDQSELARLLEQHELVEMRRVAVDLYCRTGRHEKALELCKKDSLFRDAVA
TAADSGNSEMAENLARFFLHNNRPECFSFCLYSCYEIIRADVALELSWQHQATDFTMPYM
IQKLHDLTSRLSRLESERAAQLQRKKEKQQAQEAEINEDPSIVIQGLQPTQQTPMLGYGP
FGNGPSAYSQSGLLSLPPAPGTWNSQMNFQPSRSS
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaccggtacaactagaggaaatattatctttaacgtcgttgggcatcaacacg
gaatccatatctttcagcaccgtaactatggaatcggacaaatacctctgcgtgagggaa
gtttccggtggtagtcagaatcaagtggcaattattgacatacaggatcctgccaacatc
attagacgccccataacagcagactctgtcttgatgaatcctgccaccaaagtgttggcg
ttgaaggctggagtacagcttcaactttttgatatcggaaagaagagcaaggtgaagtct
tatgtaatggaggaagaagttttgttctggaagtggctttctcagaaaactcttggtctt
gtcacttcgcattctgtttatcattgggattgtagcgacacaagttcagaaccggtgaaa
atgtatgataggcattctactttgatgaatgcacagattataaattatcgggcagacgaa
gatgagaagtggttagtattgatcggattgcaacaagaaggagacaaggttgttggaagg
atgcagttgtactcagtggagcgtcgtgtatctcaagctattgaaggccatgcagcagca
ttttgtaagtttcaaatcaactcaaaggatcctggtacaaaactatttgtatttgcaact
aaaacctccaatgcaagtaagtttcacgtcatcgaaattggtcaagataagaagccttcg
gatgcccctcgcttttcaaagtgtgttacggacatatattatcctccagaagcaaccgag
aaggatttccctgtagccttacaggtatcttccatgtattcatttgcttatttagtcaca
aggctaggatacgttcaagtttatgatttagagagtggaagatgtctctacatgaatcgc
attacagagtctactattttccttacggcggtacataccaacaccggtggttttgttggt
ttgaatcgaagaggacaattgttaggattttctgtagaacctaataattttgttccttac
attcttgattcattgggagatgttcaactagctatcaaagtagcatctagaaacaaactt
cccggagctgaagatctatatgaaagatactttgaccaactgttcaatgcgggaaattat
aaagaagctgcaagagtggcagcagagtctcctggaggaatcttaagaactcctgaaact
attgccaagttcaagtcagtcccagctgcccaaggacagccttctgctttattgttgtat
tttcaagctttactggaacgaggtgcactaaatcgttttgaaagtgcagagttgggtggt
caagttattcaatttggtcgtactcagcttttggaacgttggatgaatgaagacaagata
acttgtagtgaggaattgggtgacgttgtgaggtcttcagacccaaagttggcacttcag
atatatttaaaggccgaagcacacggaaaagttattgaggcatttttagaaaatggagct
tatgataagattttagtatatgcgaagcgagtcggactttctgtggaacccatggaactt
attcaaacagcagttaactattctcctaagagtgctcttgacctagctcaatatttcttg
aaacaattccaagaaggtggaggaaaacctttggatcatgctgccattgcagaaatgttt
tattctcgtggtttgatacaagaaggaacatcttacttacttgatgcgttgaaggacgat
cgtgccgaagatgctgaactgcagacaagactactggaagttaatctactttccgcaccg
ccggtagcagatgcgattatggcacagaacatttttcactattatgaccgaaggaagatt
gccaatctttgtgagagacaaggtcttttccagcgagctttagaaaactataacgacctt
gatgatattaaaagagttatggcaaatactcatgcacttagtcctgaatttctgattgga
tatttttctaatctttcacctgaagattctttagagtgcttaaaggagcttctcagagtc
aatccaagagggaattcgcagttatgtgctcaaatagctagcaactatgcagatcagctt
ggccctcaacgagtgatatccttgtttgaagagcgaggtcttacagaaggcgtattttat
ttcttgggtggtatagtaaactactcggaagaccccgacgttcatttcaaatatatagaa
actgcaatcaaattgggtcaattccacgaagctgaaagagttactagagaaagtaacttt
tatgatccagaaaaagtgaaagattttttaatggatatgagaccaaaggatcccaggcct
cttattaatgtctgtgatcgttttggatacattcctgagctgatccgatatatggtaaag
aacaatcaacttaagtttattgaaggctatgtacaacgagtcaatccagcaaagactcct
caagtgattggggctctgatagatcttgacgttgaggaatactttatcaaagatttgttg
cagtcggtgaagaatttagttccagtagatgaacttgtaaatgaggttgaacggagagga
cgtttaaagatattgttgcaatttttagaagccaaggttgcagatggttctacggaatcc
tctgttcattctgctctagcaaaagtgtatgtagactgcaacattaatcctgaacacttt
ttagagacgaactcttattatgatcccctggttgttggtccttattgcgagaagagggat
ccatatttcgcatatatcgcgtatcgcaaaggtcaatgtgatgatgagctattgagcgtt
accaatcgcaatggattatttaaagaacaggcgagatacgttgttgaaagagaagattct
gatctttgggctcgagttctttcaccagataatgaaaatagacgccaatttattgatcaa
gctgtgaatactgctttaccagagcagaagaacccagagagaatttcagtcgcagtaaaa
gcttttatgacagcagatctacctcacgagttgattgagctattggaaaaacttgttctt
cgtggcagtggttcttttgccaacaaccgaaacttgcaaaacttgttgattcttactgct
ataaagtcagatacatcgagagtgatggattatgttcgaaaattggataatttcgatggc
atggatatcgcacctgtcgccattgatgcaggattgtatgaagaagcctttgagatttat
tgcaagtttaagcaaccagaggctgcagtagacgttttgttggaacaaattggagatttg
aaccgcgcaacggagtttgcagagaaagtcaactcaccaatggtttggagtaaacttggc
attgcaagattagaacatggagatgttgttggcggtgtgaatgctttgttaagagctaaa
gaccctgcaccctatcaaaaagtagtagaagcagcgagagcaacagatggagatcaatcg
gcatttgaagcagtcatcaaattcttacatatggcgagaaccaaagtgaaagatcttgta
tttgtggatactgaactagtctatgctttctgtgtttgtgaccgtttgaatgaaatggaa
gaatttgttgctggtgctaattctgccaatttagaggaagttggcgatcgttgttttgat
gagcaacgatttaatgcggctaaaatcttatttagtaaaattggtaattttgccaaatta
gcacccgttcttgtatgtcttggagactattccggagctgttgaagccgcaaagaaagca
gatcgtctgaagacatggaaactagtttgttatgcgtgtctagaagctgaagaacttcat
catgcacaagtttgtggtcttcatattattgttgaaccggaagagttggacgagatattg
cagttttatcaaaatcttggctatttcgaagcggctatagagctactagaaggtggagtt
tctttagaacgagctcatgcgggcatctttacggaacttggaatactctactctaaatat
cgtgaagagtctttgatggaccacttaaagatgtggtggcaacgttgtagcattccccgt
ttgattcgagctacggaggctgcttctcagtggccagaactttgcttcttatatattcgt
tatgacgagttggataatgctgctaatattatgatgaatcactcaccttcctgttggtca
cattcaggtttcacagaagtcatgtcaaaagtcacaaacactgaaatattatatcgttcg
gtggaattttatttggatgaacatcccaacttactgaacgagcttctttcgttgatttcc
acgaaaatcgattctggtcgtgtagtatatattgtgcgtcgtgcaggtgaacaagaaatg
ggtccattgggctatctgccaattgtcaaacctttcttaatgaaagttcaagagaacaat
attgctacagtcaatgaagcacttcatgatatatttgtcgatgaggaagacatagctagt
cttagacagtccatccagaaatatgataacttcgaccaatcggaacttgcaagattattg
gaacaacacgaattggtagaaatgagacgtgttgctgttgatttgtattgtcgaaccgga
agacatgaaaaggcattagagctgtgtaagaaagatagtctctttcgtgatgctgttgca
actgcagcagacagtggaaattcggaaatggcagagaaccttgcgagattctttttacac
aacaatcggccagagtgtttttcattctgtttgtattcctgttacgagattattcgtgct
gatgtagcattggaattgagttggcagcatcaagctactgacttcactatgccttatatg
attcaaaaattacatgatcttacctcgagattgagcagactggaaagtgaaagagctgca
caactccagcgcaagaaagaaaaacagcaagcacaggaagcagaaattaatgaggatcct
tctatagttattcaaggattacaaccaacccaacagacacccatgctgggatatggacct
tttggaaacggaccttctgcatattcccagagtggtttacttagtttacctccggcacct
gggacttggaacagtcaaatgaacttccagccttctcgttcttcgtaa
DBGET
integrated database retrieval system