Galdieria sulphuraria: Gasu_28270
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Entry
Gasu_28270 CDS
T02926
Name
(RefSeq) putative nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Gasu_28270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_28270
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_28270
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
Gasu_28270
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Gasu_28270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
ELP6
Motif
Other DBs
NCBI-GeneID:
17088596
NCBI-ProteinID:
XP_005706347
UniProt:
M2XIB6
LinkDB
All DBs
Position
Unknown
AA seq
1093 aa
AA seq
DB search
MQTPRTSFRRALPFPKTFSTPYDIDNNGRKINLELATTPPHSSYTESVNSQGIKDPANFL
SSCETELRFGFFSALSGLELAKKCSSVDLSSENQVDFVLSEIQSQLNSKREIISQLLQDR
SLHPVYREPLERLLKVLQSERDTWYLLNIVTVSSPVDSVTASLKPPAHWYDKQTTTLIKC
RCILEWCEKVAMERIFGEKPDETPENCVRKVEQKLAPLNDPAYCWSHTSSLEGKTKLDPD
YPFRKHELHQTDRHADDHICHQVYILFRVGLLDKAILVTEKVEQVWRGICLLGFFGAWNA
ASNGEIGQTWNLWKLAAKEIASNPSTNIYERSVFSALCGMPSRALSVCQTWEDQVWIYFF
CEVLKFWEEFLFSESPSLRSEEHIFSVFEQCEGIDKDGLELNVMRRVQSFLALGIDLSSH
LAQMLLQFLLSCQSAHEDWSWFLRFSAHVVILLRISRGNEEDELFQRYSEQILLAYCKHL
LFLYVSDEMQAAEQGLTRSKTPYDEIMMVYFSYLMDESNLVTCCVEYMVSALKADTMTEQ
VRLELKSRQLSQLHSDERRTSCLGKIGQYLASFPRSMLNKIVETAVAHVWNHYLSNEESD
DVRILDSDLFLIRSVDFLIFPAYQNYHLAVACVNLFVRKFILSGKVLSAQNTLDEISEDV
LLEIEKERSLWSLSHEFRCWQQFFKAWDAILEWRKYAMSQRPASLPSNISHILNPTDDNV
STEEQLWARHVLENYETEWKQYLTHCNSLGEILSKEVISTLTMEGGWLVDSLPYEPPVSV
CLNIFDHVERQLELEKIRRQYVPLMLMQLVDVYKQMGKLSSCVELVQLVAEDASQFLSDL
GTEVLEPFMQQIIQVYLERTFRSDLMKSDPHLVLSIIHFHMQVAWWRLLGWSAKDKPLSQ
YIVVKDNAFCEGAPFMYQLASVYLQNNFCLLYLSTETPWYSLYLSLRKLGVRLDSSFFKG
RILFLDGMDSLETTQQDYPDCFFQHVKVNVKNPYDLTRQVCSSMDQWLTERLDSEPLSLA
ILVDSATSILYLSNQSNSFSLLFHYLRVMGRKLSPTLYCVCQLIHFDMGYGDELLKEAKF
YDSLILQLDALPT
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacgccacgaacttcgttcaggcgcgcacttccgtttccaaaaacttttagcaca
ccgtatgatatagataataacgggagaaaaatcaacttggaacttgccaccactccgcca
cactcaagttacacggaatcagtcaactcgcaagggataaaagatccagcgaattttctc
tctagctgcgagacggaactccgatttggttttttttctgctttaagcgggttggaattg
gcaaaaaaatgttcttcagtagacctttcaagtgaaaaccaagtagacttcgtcttgagt
gaaattcagtctcaacttaactccaaacgtgaaattatttcgcagctgttacaggaccgt
tccctgcacccggtttacagagagccacttgaaagattattgaaagttctccaaagtgag
agagatacttggtacttgttgaacatagtgacagtttccagccctgtggattcagtgact
gcttctttgaaaccgcccgcgcattggtatgacaaacaaactacgacattgatcaaatgt
agatgtattttggaatggtgtgaaaaagtggctatggaacgtatttttggagaaaagcct
gatgagacacccgagaactgtgtccgcaaggttgaacaaaagctggcaccgctaaatgac
cctgcatattgttggtcacatacctcaagtttggaaggtaagacaaaactggacccggat
tatccatttagaaaacacgagcttcatcaaactgatcgacatgcggatgaccacatttgt
catcaagtgtatattttgtttcgtgtcggcttgttggataaagcaattctcgtcacagaa
aaggtggagcaagtatggagaggcatttgtttgttaggtttctttggtgcttggaatgct
gctagtaacggagagattggacaaacttggaatttgtggaaactagccgcaaaggaaatt
gcttcgaacccgtcaacgaatatatatgaaaggagcgtttttagtgctctttgcgggatg
ccttctagagctctttcagtgtgtcagacttgggaagatcaagtgtggatttattttttc
tgtgaagttttaaagttttgggaagaatttctcttttcagaatctccatctttgcgtagt
gaagaacacattttttcggtctttgaacaatgtgaagggatagataaagacggtttagaa
ttgaatgtcatgcgtcgggttcaaagttttttagctttaggtattgatttgagttctcat
ttagctcaaatgcttttgcagtttcttttatcttgtcagagtgcgcatgaagattggtcc
tggtttttgcggtttagtgcccatgtggtcattctactaagaataagtcgtgggaatgaa
gaggatgagctatttcagcgatattcagaacaaattttacttgcgtattgtaaacatctt
ctatttttgtacgtgtcagatgaaatgcaggcagcagaacaaggactgacgaggtcaaag
acaccttatgatgaaattatgatggtttacttttcttatctaatggatgagtccaatttg
gtgacctgttgtgtagaatatatggtcagtgctttgaaagcagatacaatgacggaacaa
gttcgtttggaactaaagagtcgacaactttctcaacttcattcagatgaacgccgaact
tcgtgcttggggaagattggacagtacttagctagttttcctcgttctatgttaaacaaa
atagtagaaactgcagttgctcacgtgtggaaccattatctatcgaatgaagaatctgat
gatgtcagaattttggacagtgatctgtttcttatccgaagtgtcgactttttaattttc
ccagcctatcaaaattaccatctagcagttgcttgcgtcaatttatttgtgagaaagttc
atattatccggtaaagttttatcagctcaaaatactcttgatgagatttcagaagatgtt
ttactggaaattgagaaggagcggtccttatggtctttgagtcatgaattccgttgttgg
caacagtttttcaaggcatgggatgccattttggagtggagaaaatacgccatgtcacag
cgcccagcatctcttccatcgaatatcagccatattttgaatccaactgatgataatgtt
tccactgaagaacaactttgggcaaggcatgtgctggaaaattacgaaacggaatggaag
cagtatctaactcattgcaattcattgggagaaatcttatcgaaggaggttatttccact
ttaactatggaaggaggctggctggtggattctcttccatatgaacctccagtttcagtg
tgtcttaatatttttgatcatgtggaacgtcaattagaactggaaaagataagacgacaa
tatgttccattgatgctcatgcaattggttgatgtttacaagcagatgggaaagttgagt
tcttgtgttgaactcgttcagcttgtagccgaggatgcctctcagtttctttcggatttg
ggtacagaagtattggaaccatttatgcaacaaattattcaagtttatttggagagaact
tttcgaagcgaccttatgaaaagtgacccacatttggttctttccattattcattttcac
atgcaagttgcctggtggcgccttttgggttggtcagccaaggataagccactttcacaa
tatattgttgtgaaagacaatgcattttgtgaaggagcaccgtttatgtatcaactggct
tcagtctacttgcagaataatttttgtttgttgtatttgtctactgaaacaccttggtat
tcattatatttgagtttaagaaagttgggagtacgtctagactccagcttttttaagggg
cgcatactgttccttgatggtatggactctctggaaacaacccaacaggattaccctgac
tgtttttttcaacacgtcaaagtgaacgttaagaatccatacgatttgactagacaagtt
tgtagttcgatggatcagtggctcactgaaagactcgattcggaaccactgtctttagct
attcttgtagatagtgctacttctattctctatctcagtaatcagtcaaacagtttcagt
ttattgtttcactatcttcgggttatgggacgaaagttaagtccaacactatattgtgta
tgccaacttatccattttgatatgggttatggtgacgagcttctcaaggaagcaaagttt
tatgatagtcttatcttacagttggatgctttgccaacgtga
DBGET
integrated database retrieval system
