Galdieria sulphuraria: Gasu_28370
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Entry
Gasu_28370 CDS
T02926
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gasu_28370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_28370
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Gasu_28370
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Gasu_28370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
17088606
NCBI-ProteinID:
XP_005706357
UniProt:
M2XIE0
LinkDB
All DBs
Position
Unknown
AA seq
249 aa
AA seq
DB search
MPREELISPDGLRTDGRRPLEIRKVTCRMGILPRADGSCHLEMGNTIVLATVYGPRELSS
RQSSCGIIRCEYSMASFASTDRRRGKRSDRNSVEMASSIKKTFENVLLTDLFPKSRVDIF
IQVLQADGSERSAAINAVTIAMVNAGIPMKDLIVSCSAGYMENTTVMDLNHVEMITRGPQ
LTLAIYASTERMATAHLESKASFEIFENLIAIAKKGCLQMFDVMHSSIERYSLNLIASRD
HIATFGSRA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtgaagaactcatttcaccagatggtttaagaactgatggaagacgcccttta
gagataagaaaagtaacctgtcgaatgggtattttgcctcgtgcagacggaagttgtcac
ttggaaatgggaaatacgattgttttggcaaccgtatacgggcctcgtgagttgtcttca
cgtcagtcttcgtgtggaatcatccgctgtgaatacagtatggcatcttttgcgtccacc
gacagacgaagagggaagagaagtgacagaaatagtgttgaaatggcttcttccattaag
aagacctttgagaatgtattgttgaccgatttatttcccaagtctcgtgtcgatatcttc
attcaagtgttgcaagcagatggaagtgaacgcagtgctgcgataaatgccgttactata
gcaatggtgaatgcgggaatacctatgaaggacttgattgtttcgtgctcagccggatat
atggagaataccactgtgatggacttgaatcatgtagaaatgataacgagaggcccacaa
cttactcttgctatctacgcaagtaccgaaagaatggcaactgctcatttggaatcaaaa
gcatcttttgaaatctttgagaatttgattgcaattgctaagaaaggatgtttacaaatg
ttcgatgtgatgcattctagtattgaaagatattccttgaacttgatcgcttctcgtgat
catattgcaacatttggttcgagggcttga
DBGET
integrated database retrieval system
