Galdieria sulphuraria: Gasu_29890
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Entry
Gasu_29890 CDS
T02926
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Gasu_29890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_29890
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
Gasu_29890
U7-dependent histone pre-mRNA processing factors
Gasu_29890
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
Beta-Casp
RMMBL
CPSF100_C
Lactamase_B
Lactamase_B_2
Beta_lactamase3
Anti-Pycsar_Apyc1
DUF3732
Motif
Other DBs
NCBI-GeneID:
17088332
NCBI-ProteinID:
XP_005706067
UniProt:
M2XHI7
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MSSILRFTPLYGVKTEDLAVCYLLEIDDFRILLDCGWNDRFEETLLEPLRRIAPRVDAVL
ISHPDLFHLGALPYAVAKLGLRAPTYATLPVWRMGQLFMYDAHQSRAMQEDFQVFDLDDV
DSAFENFIQLKYQQIVNFSERGKGITITPHPAGHMIGGTVWKIQSETEEIVYANDFNHKR
ERHLNPTTLQYLTRPSHLIISASQALVRPSSSSSISGQQFPKGSQIYSRSNPLTEICEEA
LSTLRQGGDVVIPVDTAGRVLELALGFEDFWATEKLGSSYAVAIIEHVSFNTIDFAKSMM
EWMSDAVINKFDTTRENPFHLKHIHLCHSRSELSSLLSPKVILTSVASLECGFSRELVVE
MVSNKKNKLILVDRLEPNTLAHSIYNVLEDESEGKTVQLPRIALRLNRRVPLQGAELEEY
YANMKTSNESVSLLQNPSEMHFENRLSSSTEEEQEEEDLSSMSDDEKDKATNHFGSFSGE
SKIDKARSEMIVFSNARKQTDDIWDDYGLVIDTKCFMIGEDPGEIEGDSEEFSETSMDDA
LNNPVDFRGLFQEDEQVPTKCIQVNVNLEVACQIRYVGCAGLSDGRSLRQLLTAVAPRRV
IIVHGSRKETAAIKEFCERGLTKDIFCPRAMETIDITTDTSIFRLTLRDRLLSSCIWKRI
GDYELSFLDGTIRVENESSPKEKETNVSHTQEYVLEQRSSLDSGHPIVFIGEGKLSDLRP
ALSRVGIPSDFIGDSVSNGNSGRSIMP
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctattcttaggtttaccccgttgtatggagtgaagactgaagacttagctgtt
tgttatttattggagattgacgactttcgaatactattggattgcggttggaacgaccgt
ttcgaagaaactctattggagcctttgcgtcgaattgcaccaagagtagatgcggttctc
atctctcatcctgatctgtttcacttaggagcacttccatatgcagttgcaaagttagga
ttacgtgcaccaacatacgcaacattgcctgtgtggagaatgggtcagttatttatgtat
gacgctcatcagagtcgagctatgcaagaggattttcaagtctttgacctagacgacgta
gactctgcttttgaaaattttattcaacttaaatatcaacaaatagtaaacttttctgaa
cgaggaaaaggaataactattactcctcatcccgcggggcatatgataggaggaaccgtt
tggaaaatacaaagtgaaactgaagaaattgtttacgcaaatgatttcaaccacaaaaga
gaacgacatctcaatcccactactcttcagtatctgacgagaccgagccatcttattatt
agcgcttcacaagctctagttcgtccatcatcttcctcttccatctctggacaacagttt
ccaaaaggttcacagatatattctaggtctaaccctttgacagaaatttgtgaagaagca
ttgagcactttaagacaaggaggtgatgtggtgatacctgtagacactgcaggtagagtt
ctagaactagctcttggattcgaggatttttgggctactgaaaaacttgggtcaagttat
gctgttgccatcattgagcatgtatcctttaataccatagactttgccaaaagtatgatg
gaatggatgtccgatgccgtaattaacaagtttgacactacaagagagaatccatttcat
ttaaagcacattcatctgtgccacagtcgttcagagttgagctctctgttgtcacctaaa
gttatcttgacgtcggtggcttcgcttgaatgtggattctccagagaattagttgtagaa
atggtatcgaataagaaaaacaaattgattttagtggaccgtctagaaccgaacacattg
gcacattccatttataatgtactagaagatgaatcagaagggaagacagttcagttacct
cgaattgcgctgcggttgaataggcgtgttccactccaaggagcagaacttgaagaatat
tatgcaaatatgaaaacctcgaatgagtccgttagccttttgcaaaacccaagtgagatg
catttcgaaaatagattgtcttcatcaaccgaagaagaacaggaggaagaagatttgagc
tcaatgagtgacgacgaaaaggacaaggccacaaatcattttggctccttttctggagaa
agcaagattgacaaagctcgttctgaaatgattgtattctcgaatgcgcgtaagcagact
gatgatatttgggatgactacggtttagtaatcgatacgaaatgtttcatgattggtgag
gacccaggagagatagagggagatagtgaagagtttagcgagacttcgatggacgacgct
ttgaataatcctgtggattttcgtggtttatttcaggaagacgaacaagttccgacaaaa
tgtattcaagtaaatgtcaacttggaggttgcttgtcaaattagatatgttggttgtgct
ggtctttcagatggtcgttcgttaaggcagttgttaactgctgtggctccaagaagagta
atcattgtacatgggagtcgtaaagaaactgccgctattaaagaattttgtgaacgaggg
ctcaccaaagatattttctgccccagagcaatggaaacaatagatataactacggatact
tctatctttaggttgactttaagggatcgtctcttgtcaagttgcatttggaaaaggatt
ggagattatgaattgtcgttcttagatggaactatccgggtagaaaatgaatcgtctcca
aaagagaaagaaacaaatgtaagtcatactcaagaatatgttttagagcagcgttcttct
ttggatagtgggcatcccattgtattcattggcgaaggaaagttgtccgatttgagacct
gctctcagtcgtgtaggaattccttccgatttcatcggcgacagcgtctcaaatggcaac
tctggaaggtccattatgccctga
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