Galdieria sulphuraria: Gasu_31280
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Entry
Gasu_31280 CDS
T02926
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Gasu_31280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsl04121
]
Gasu_31280
Enzymes [BR:
gsl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
Gasu_31280
Ubiquitin system [BR:
gsl04121
]
Ubiquitin ligases (E3)
HECT type E3
Gasu_31280
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
Arm
HEAT_EZ
ARM_ARMC5
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
17088279
NCBI-ProteinID:
XP_005706007
UniProt:
M2XHD0
LinkDB
All DBs
Position
Unknown
AA seq
1729 aa
AA seq
DB search
METRSKDRKRSLECTSRNTEKRVDSCAETNYCLSRGERDQHKQGKGFRLPGLSRSKQTNK
KEKNLSEFNSQPTTEDLQPSSSKTRGTKRHCIKDSRIKKGFLFKSSKRLRSNSSERTKEM
AQRGNTEANSDENRKSFESHSSSSSANDRVNVSRRNEGMSSPELHEASTSRRIATSSSLH
GLLRRLGTGIEDLFAVERGVRTSHLLGSIRDPTDESQRLAALNDLCEYLSIGTEDSLLSF
QIDSFVPALVTLLEESQSPDTMLLAARALSHMMEVLPHSAAAITHHGAPSLLCNTLLSIE
YIDLAEQALTALEKMSREFPGPVLRSGGLLAVLSFIDFFSTGVQRTAASTAANLCRSVTL
DAFDKVEEALPALYQLLSFEDSRIRESGITAFARLTDSFRWHSAELSKIFALGSSTGEDF
PILTKMMDFLLFAISSLSIHTVSDILNLLSNGARGSAVLLKRILTEQRVGENGHVMTIVV
LLKDLLEQDSSATCSASDVLQLADALVTESEEYLDNSNHTMQRKIVELYRIEVSSRFSDQ
SRSDIERLRRNMLLESPEILHPYGTLLFPQFIKLFKSSTSTVVKRQIMSCMRKFVGCVSS
DVLKTTLFDNPTESISSTFIPFISSLLSFNGSKMENAFGTHLAVACMNSLKESLRVPFVR
EGVFYELRRLKERCQSSSEEDSANGALVQNIDGILEFYSESEACQSQNPFFESLREIGHF
LSNMPEINVCPEEMEKKLDALLSMFHGEKTVSRFEMIQSDTISAVVNFFAPNGNDLSRKQ
RLAMFAKSARRNPEGFRNLIARTVDVLAATEDLPVISPDMTVGTALHLLHQPLKFKLKQQ
SRTRHAFSICASIEPLTSIRAIEKFVAKRLEQRNNTNLGSTRNRRFRSNTGQRLPLLRNQ
GDPEDTTDEDSVAGIEEGWDSAQESSQSYESPSEDTTVYRTLSIAEEEDALEEEEEEEDM
SDFDDEDGTDVWVDQSAPVADVSEEQEEADEDFSRDEDGWDTLYNDALSSSLPAVELDMD
TLSPTRPCALGNSFSDHYSSSISPQQQESYIRPSNSNKTVGVSSRSRICRRKLSFFMNGH
PVPSHFSALMCVTNFFSTNSETEPLVPEPSLWDTFYTLEFNEQVVIEDDEDLNVEKFTEE
MHSGQPSTVKSVKTPKYVSEVAGNCIMLLNDLFRINKFEIRENDRVETTVSVPSVVVSED
VFHSHKLSSKLIRQLSDPVILASASYPRWVPYLVRHSPFLFPFETRQLAFQLTYLGIARA
FRKLHQRAEALHQLHHPRLLRGGSSLASFFSLNRRLDRYQDRESLLGRLPRQKVRISRNC
ILRSAMKALELYCEEKSILEIEFFDEVGTGLGPTLEFYTLVSNELQRSDLGLWKSVDGSC
CSERISPKRSRHRKNRVSWKSLENTEEKKYTQPPGNGLFPNVMDKADRSPQAQQILELFH
FMGKFCAKALLDGRLLDLRLSPHFLRLVHAYIEHKFCLDSADIFLSGYDPSLEDLAQVDP
ALASSLYSMLQLKESTKRGEEDPIENLCVYFNVPGAENVELFPDGSCCPVTEENVEEYVS
RVCRYLLVDGVSRQVAAFCAGCEEMLSPTSWLQFMPEEFESLLCGPSYERWEWNSLVAAT
KCDHGYTHESPAVQYLFQVLSKYNLEEQRMFLTFVTGTPRLPIGGLSALNPRLTIVKRTP
EAGRSPDECLPTVMTCTNYLKLPQYSSYEIAKERLEYAIREGQGSFHLS
NT seq
5190 nt
NT seq
+upstream
nt +downstream
nt
atggagacaagaagtaaggaccgtaagaggtccttggagtgtacatcgagaaatacagaa
aaaagagtcgactcttgtgcagaaacaaactattgtctgtcacgtggagaaagggaccaa
cacaaacaaggaaagggttttcgtttacctggtttgtcgcgttctaagcagacaaacaaa
aaggagaagaatctttccgagttcaactcacaaccaacaacagaagacttgcaaccctct
agttcgaaaacaagaggtactaagcgtcactgtataaaggatagtagaattaaaaaggga
tttttattcaaaagttcaaagaggttgcgaagtaacagctctgaaaggacgaaggaaatg
gcgcaaagagggaacaccgaggcaaactccgacgaaaacagaaagagcttcgagtcgcat
agttcttcaagctctgcaaatgacagggtgaatgtttccagaaggaatgagggaatgtct
tccccagagcttcacgaagcatccacttctagacgtattgcaacatctagctctttgcat
ggcttacttagaagactaggaaccggtattgaggacttgtttgctgtagaacgaggtgtg
cgcactagtcacttgttaggttcaattcgcgaccccactgacgagtcacaaagactggca
gctctgaacgacctttgtgaatatttatctattggaacagaggattctttgctttccttc
caaatagattcgttcgtgcctgcgttagtgacccttctggaggagagtcagtcccctgat
acgatgctgcttgctgctcgagctttgagtcatatgatggaagttcttcctcactcggca
gcggctatcactcatcacggagcacctagtttgctttgtaacacgctattatccatagaa
tatatagacttagcagaacaggctttgactgcacttgaaaagatgagtcgagaatttcca
ggtccggttcttcgttctggtggcctacttgcagtgctatcttttatcgattttttctcg
acaggtgtccaaagaacagcagccagcactgctgccaatttgtgtcgttccgttacgttg
gatgcattcgacaaggtagaagaggcattgcctgcattgtatcagttgctgtcttttgaa
gactctcgtattcgggaaagcgggataactgcatttgcccgtctgacggattcttttaga
tggcattcggctgaactttcgaaaatttttgcacttggaagttccacaggcgaggatttt
cctattcttacaaagatgatggattttttgttgttcgcaatatcatccttgtcgattcat
accgtatctgatattttaaacctcttatcaaatggagctaggggctctgcagttttgttg
aagcgtattctcacagagcaacgagtgggtgaaaacggacatgtaatgacgattgtagtc
ttattaaaggatttgcttgaacaagacagttctgcgacgtgctcggcatcggatgtgcta
caactggcagatgcccttgtaacagaatccgaagaatacttggataatagcaaccacact
atgcaaagaaagatagtggaactttatcgaattgaagtttcatcacgcttttccgatcag
tccagaagtgatatcgagagactaagaaggaatatgcttcttgagtcacctgaaatacta
catccatatggtactctactgtttccccaatttatcaagttgtttaagtcttcgaccagt
accgtagtgaaacgacagattatgtcttgcatgagaaagtttgttggatgtgtttcgagt
gacgtattgaagacaaccttgtttgataatcctacagaaagtatcagcagcacctttatt
ccatttatttcaagtcttttgagtttcaatggttccaaaatggaaaacgcttttggtacg
catttggcagttgcgtgtatgaatagtttgaaagagtctttgagagttccttttgttcgt
gaaggagtattttatgagcttcgaaggctgaaggaacgctgtcaatcctcctcagaggaa
gactcagcaaatggagctcttgtgcagaatatcgatggtatcttggaattctattcagag
tcggaagcatgtcaatctcagaacccattttttgaatcattaagagagattgggcacttt
ttaagtaatatgccggagataaatgtgtgtccggaggagatggaaaagaagttggatgct
ttattgagtatgtttcatggggaaaagactgtttcaaggtttgaaatgattcaaagcgac
actatttctgctgtggtgaatttttttgccccgaatggaaacgatttgtctcgtaaacaa
cgactcgcaatgtttgctaaaagtgcaagaagaaatccagaaggttttcgaaaccttata
gcaagaactgtggatgtattggcagcaactgaagatcttccagtcatttcccctgatatg
actgttggaaccgctcttcatttattgcatcaacctctcaagtttaaactaaaacagcag
tcaagaacacgacacgcattttcaatctgtgcttctatagagcctttaactagcatccgt
gccatagaaaaatttgttgccaaacgtcttgaacagaggaataataccaaccttggaagc
acccgaaacagaaggtttcgttcgaatactgggcagcgtcttccgttgttgcgaaatcag
ggggatcctgaagatacgacagatgaagatagtgttgcaggtattgaagaaggatgggat
tccgcgcaggaaagttcacaaagttatgaaagcccatcagaagacaccactgtctacaga
acattatctattgctgaagaagaggatgctttggaagaagaagaagaagaagaggatatg
agtgattttgatgatgaagatggtacagacgtatgggttgatcaatctgctccggtcgct
gatgtcagcgaagaacaagaagaagctgatgaagactttagtagagacgaagatggttgg
gacactctttacaacgacgctttgagttcttctctcccggcagtagaattagatatggat
acgttgtctcctacacgtccatgtgctttaggcaattctttttctgaccattattcgtcc
tccatttcgccacagcaacaggaatcgtatattcgtccatcaaatagtaacaaaactgtt
ggcgtgtcatctcgctcaagaatttgtagaaggaaactaagtttttttatgaatggacat
ccagttccttcccacttttctgctttgatgtgcgtaactaattttttctcaacaaactcg
gaaacagagccgttagttccagagcctagtctttgggataccttttatactcttgaattt
aatgaacaagttgtaattgaagatgatgaggatttgaacgtagagaagtttacagaggag
atgcattcaggacagccttctacagtaaaatctgtcaaaacaccaaaatacgtttcggag
gttgcaggaaattgtataatgttgctaaatgatcttttccgtatcaacaagtttgaaatt
cgggaaaatgacagagtggaaacaacagtttcagtgcctagcgttgttgtttcggaagac
gtctttcacagtcataaactgtcttccaaactgattcggcaactttcggatcccgtcatt
cttgctagtgcctcttatccacgttgggtgccgtatcttgtacgtcattctccattcctg
tttccttttgaaacaagacaattggcctttcagttaacgtatttgggtattgcccgtgca
tttcgcaaactccaccaacgagcagaagctcttcaccaacttcatcatccacgtctgttg
agaggtggaagttcattggcaagcttctttagtttgaaccgtaggcttgatcgttatcaa
gatcgagaaagccttcttggaaggttacccaggcaaaaggttcggatatctagaaattgt
attcttcgttctgcaatgaaagctttggaactctattgtgaagaaaagagtatactggaa
attgaattctttgacgaagtaggaacaggattggggccaacattggaattttatactttg
gtgagtaatgaacttcaacgaagtgatttgggattgtggaaaagtgtcgatggtagttgt
tgttctgagcgtatatctccaaagagatctcgtcaccgcaagaatcgtgtttcttggaaa
agtctggagaatacggaagaaaagaagtatacacagcctccaggaaatgggctgtttcct
aatgttatggataaagctgatcgttcacctcaagcacaacaaattttggaattgttccat
tttatgggaaaattttgtgccaaagcgttattagatggacgtttgttggatttgcgtttg
tctccacattttttgagattagttcatgcatacattgagcataagttttgtttggatagc
gctgatatttttctttctggttatgatcccagtttagaagatttggctcaagtagaccct
gccttagcttcttcattatactctatgttgcaattgaaggaatcgacaaagagaggagaa
gaggatcccatcgaaaacttatgtgtatattttaatgttccaggagcagaaaatgtggag
ttgtttccagatggaagttgctgtcctgttactgaagaaaatgtggaagagtatgttagt
cgtgtttgcagatatttgttagtagatggagtatctagacaagttgctgccttttgtgct
ggttgtgaagagatgttatctccaacgagttggttacagtttatgcctgaagaatttgag
tcgttgttatgtggacctagttatgaaagatgggagtggaatagtttggttgctgctacg
aaatgtgatcatggctatactcatgaaagtcctgccgtacaatatttgtttcaagtattg
tctaaatataatttagaagaacaaaggatgtttctgacatttgtgactggcactcctcga
ctgcctattggaggtctaagcgctttgaatcctcgtttaactattgtgaagcgaacacca
gaagctggacgaagtcccgatgaatgtttgcctactgtcatgacgtgtaccaattacttg
aaacttcctcagtactcttcttatgaaattgccaaagaacggttggaatatgctattcga
gaaggtcaagggagtttccatttatcttag
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integrated database retrieval system
