Galdieria sulphuraria: Gasu_32920
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Entry
Gasu_32920 CDS
T02926
Name
(RefSeq) putative DNA helicase required for mitotic chromosome segregation CHL1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03440
Homologous recombination
gsl03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Gasu_32920
03460 Fanconi anemia pathway
Gasu_32920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_32920
Enzymes [BR:
gsl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Gasu_32920
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
Gasu_32920
FA (Fanconi anemia) pathway
Downstream FA components
Gasu_32920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
MMtag
DEAD
ResIII
PhoH
HBB
Motif
Other DBs
NCBI-GeneID:
17088142
NCBI-ProteinID:
XP_005705804
UniProt:
M2Y0C2
LinkDB
All DBs
Position
Unknown
AA seq
984 aa
AA seq
DB search
MPFQVYGTEIEFPYEPYPVQFVFMEKILRACENSQNALLESPTGTGKSLALLCAVLAWQK
KTKNKMQLERIEKENIGKQRFDAAVAKYRHGRGKEPLADTFQDNQTNRHMEKRDLDNCLE
EKSISSDDDFQQGIGTNQTIDSDSDDWITHDEDNNLDSDKEIIPPKIFFATRTHTQIDQV
VQELRRTSYRPKMDILGSRDRYCIHNKVIRSQNRNEECKKLLEERSCSYAFGVEKVHNIK
ELSENHIHQVWDIEDLVRIGKRHNLCPYFSSQELMKTAELIFCPYSYLLDPVVRNAMQVE
LSNSIVILDEAHNIEDVCREAASCEVFIEELEQVRTELETLDMNQNTSMGRHLSLVNSFV
SGVISWCHEQDAHQKFVVDKSDFEKETFSCTGKLLLDALECCGVTKTIYSEIRRSVSRIT
NTELFLSEHLDETSTKKKRVGLPEWASITLERLMCPLEFIFNSSVDRSDDFLLVLMKTRK
GTMWSFKLCLWCFNPAVSFSYLQSHSRCIVLSSGTLTPMDSFSSELGIHFDIMNSLPHVI
DVKNQVCAIASSCGPNSVDYDSTFAASSSIAYHDCLGQSILEYCRVIPDGVICFFPSYRL
LESVVRRWRQSGYWKELESCKQVFIEPCQNDRVYFDNILLSYYHAIHKKQGALFLAVCRG
KVSEGIDFKDEYARGVIIVGLPYPNLRDLQVIQKKEYNDRYSASRKLLNGQRWYALQAFR
SLNQAIGRCIRHKNDYGVIVLLDKRYTRHETLRNLPKWLAHQIRIATYHEVAISMISHFI
PQVEARVVPLKRVIGTRRTLETRMDLLGTTGSREGNRGGRDQFSWEKVKEDKYRENYLGH
SLHAPVGLSSKKKDSQWFIKPPKRQNGGNEELKKIQRQEAIMMRASLQGIPVQDAISLAL
EQSNQVEEKNSEVTKDKSERPLSPQNESRDKNRVENDRLDDSHQDIHRRHGAYHHHTQSR
SKERHRHRSKGRSSKDRRRRRRYS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgcctttccaagtatatggtaccgagattgagttcccttatgaaccttatccagtacaa
tttgtttttatggaaaaaatattgagagcttgtgagaacagtcaaaatgctttattagaa
agtcccacgggaactggcaaatctctagctttgctttgtgcagtgttagcttggcaaaag
aaaaccaagaataaaatgcaactggagagaatagaaaaagaaaatatcggaaaacaaaga
ttcgatgcagcggtagcaaaatataggcacggaagaggaaaagaacctttggcagatact
ttccaagacaatcaaaccaataggcatatggagaaaagagacttggataattgtctagaa
gaaaaaagtatatcgagtgacgatgactttcaacaaggaattggtacaaatcagacaata
gatagcgattccgatgattggataacccatgacgaagacaataacctggatagtgacaaa
gaaataattcctcctaaaatattctttgccacacgtacacatactcaaatagatcaagtc
gtacaagaattgagacgaaccagttatagacctaaaatggatattctgggttcgcgcgat
aggtattgtatacacaacaaagtgataaggtcacagaataggaatgaggaatgcaaaaaa
ttgttggaagaaagatcttgctcttatgcctttggagttgagaaggttcataatattaaa
gaattgtcagagaatcatatccatcaggtttgggatattgaagacttggttcgaatagga
aagagacataatttatgtccctacttttcttcacaagaattgatgaaaacggccgaattg
attttttgtccttatagttatcttttagatcctgttgtaaggaatgccatgcaagtggaa
ctttccaattctattgtcattttagatgaagctcataatatagaagatgtttgtagagaa
gctgcatcttgtgaagtctttatcgaagaactcgaacaagtcagaacggagttggaaaca
ttggatatgaatcagaatacttccatgggaagacatttatctcttgtgaatagttttgtc
tcgggagttatttcttggtgtcatgaacaagatgctcatcaaaagtttgttgtagataag
agtgattttgagaaggaaacatttagctgtactgggaagttgttgttagatgctttggag
tgttgtggagtgaccaaaactatttattctgaaatacgccgtagtgtgtctagaattaca
aatactgaactttttctatcggagcatttggatgaaacttcaacaaagaagaagcgagtt
ggtcttcctgaatgggcatcgattactttggaacgtttaatgtgtccgttagaattcatt
tttaactcttcagtggatcgtagcgatgactttctactggtgttgatgaagactcgtaaa
ggaactatgtggtctttcaagctatgcttatggtgtttcaatccagctgtctcattttct
tatcttcagtcccattccagatgcattgttctttcttctggcactttgactcctatggat
tccttctcttccgaattagggattcatttcgatatcatgaactcacttcctcatgttatt
gatgtaaagaatcaagtttgtgctattgcttccagttgtggacctaattcagtggactat
gattctacctttgcagcgtccagctctattgcttatcatgattgtttgggtcagtctatt
ttagaatactgtcgtgttattccggatggagttatttgtttctttccctcctatcgtttg
ttggaaagtgtggttcgtcgttggcgtcaatctggttattggaaggagttggagtcctgt
aaacaagtatttatagagccttgtcaaaatgatagagtttattttgataatattttacta
tcttattatcacgctatccacaagaagcaaggagccttgttcctagcagtttgtagagga
aaagtaagcgaaggaattgatttcaaagatgaatatgcacgaggagtaattatagttggt
ttaccttatcccaatttgagagatctccaagtcattcagaaaaaagaatataacgataga
tatagtgcatcaagaaaattgttgaatggacagcgatggtatgctttacaagcttttcgt
tctttgaatcaagctattggacgttgtattcgacacaagaatgattatggtgtgattgtg
ttgttagataagcgctatactagacatgaaacattaaggaatcttcccaaatggttggcc
catcaaatcagaattgcgacatatcatgaagtggcgatttcgatgatttcccatttcatt
ccgcaagtagaagcgagagttgttcctttaaaacgtgtgattggtacaaggcgtacactc
gagactaggatggatttgctaggaactactggtagtagagaaggaaatagaggtggaaga
gaccagtttagttgggagaaagtaaaggaagataaatatagagagaattacttgggacat
tctttacatgcacctgtgggcttgtcttcaaagaagaaggactcacagtggtttatcaag
ccaccaaagcgccaaaatggtggaaacgaagaactcaagaaaatacaacgacaagaagcc
attatgatgagagctagtcttcaagggatacctgttcaggatgctatttcgttggcactt
gagcagtcaaatcaagtggaagaaaaaaacagtgaggtaacgaaggataagagtgaaagg
ccattgtcaccacaaaatgagtctcgtgataagaatagagtagaaaatgatagactggat
gacagtcatcaagatatacatcgacgacatggtgcgtatcatcatcacacgcaaagccgt
tcaaaggaaaggcatcgacaccgttcaaaagggcggtccagcaaagatagaagaagacga
cgtcgttattcttga
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integrated database retrieval system
