Galdieria sulphuraria: Gasu_34730
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Entry
Gasu_34730 CDS
T02926
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03018
RNA degradation
gsl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Gasu_34730
09123 Folding, sorting and degradation
03018 RNA degradation
Gasu_34730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_34730
03041 Spliceosome [BR:
gsl03041
]
Gasu_34730
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
Gasu_34730
mRNA degradation factors
5'-3' decay
Lsm complex
Gasu_34730
Spliceosome [BR:
gsl03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
Gasu_34730
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Amanitin
ZoocinA_TRD
Motif
Other DBs
NCBI-GeneID:
17087905
NCBI-ProteinID:
XP_005705601
UniProt:
M2W0E5
LinkDB
All DBs
Position
Unknown
AA seq
89 aa
AA seq
DB search
MSETIPPVLPLELVDKCIGSQIWVLMKTDKEFTGILRGFDQFVNMVLEDVSEYEWTSEGL
IRTHLDQILLNGNNICVLIPGGAGPNETL
NT seq
270 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacgattcctcctgttcttccgttggagttggtagacaagtgtattggttcc
caaatatgggttcttatgaaaacggacaaggagtttaccggtattttaagaggattcgat
cagtttgtgaatatggtattggaagatgtttcagagtatgagtggacctctgaagggctg
ataagaacgcacttggatcagatacttctcaatggaaataatatatgcgtgttgattcct
ggtggtgcaggtcccaacgaaactttgtaa
DBGET
integrated database retrieval system
