KEGG   Galdieria sulphuraria: Gasu_40950
Entry
Gasu_40950        CDS       T02926                                 
Name
(RefSeq) replication factor C subunit 3/5
  KO
K10756  replication factor C subunit 3/5
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03030  DNA replication
gsl03410  Base excision repair
gsl03420  Nucleotide excision repair
gsl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Gasu_40950
   03410 Base excision repair
    Gasu_40950
   03420 Nucleotide excision repair
    Gasu_40950
   03430 Mismatch repair
    Gasu_40950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsl03032]
    Gasu_40950
   03036 Chromosome and associated proteins [BR:gsl03036]
    Gasu_40950
   03400 DNA repair and recombination proteins [BR:gsl03400]
    Gasu_40950
DNA replication proteins [BR:gsl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Gasu_40950
  DNA Replication Termination Factors
   ELG1-RFC complex
    Gasu_40950
Chromosome and associated proteins [BR:gsl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Gasu_40950
DNA repair and recombination proteins [BR:gsl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Gasu_40950
  Check point factors
   HRAD17(Rad24)-RFC complex
    Gasu_40950
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA TraC_F_IV RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 17087238
NCBI-ProteinID: XP_005704919
UniProt: M2XY78
LinkDB
Position
Unknown
AA seq 401 aa
MKSSQYVHFFFSNEPLFFLEDLMTRQGGLLWVDKYRPKTLETLDIHPEWTEKLASLCEQG
TLPHLLFYGPSGVGKRTRIYALLRQVFGIAIEKRQVEHRFLKVGEPPKEVELTTITSAHH
IELCPADVGYNDRLVIQEIVKEIASSKPIELGNVHRGYKVVVLHDIDEVSKQAQQALRRT
MEKYTSCCRIIMSAESVTRVMEPIRSRCLGIRIPCPKKEEIEQVLQKIAKKEGLVLPDCY
ANQLVTQSKGNLRKAILLLQVGRAIAYPFSQQQQKKNEEEEESWISSQETGWDWERLCYD
IANIVIREQNPKQLCNIRNKLYELFCHAIPGDMIFRKITLHLLRMMDEEVAPQVCHWAAH
YEYGMKRGSKEIFHLEAFLAKVMYIYYSHIHTQYSMAWMDD
NT seq 1206 nt   +upstreamnt  +downstreamnt
atgaagagtagtcagtatgtccatttcttcttttcaaatgagccattattctttttggag
gatttaatgacaagacaaggtggtttattatgggttgacaaatatcgaccaaagacactt
gaaactttagatattcatcccgaatggactgaaaaacttgctagtttatgtgaacaagga
actttacctcatttgttattttatgggccttcaggtgttggaaaacgaactagaatatat
gctctattgagacaagtatttggaattgctattgaaaaacgtcaagtggaacatcgtttt
ttgaaagtgggagaaccacccaaggaagtggaactaactaccatcacttcagcacatcat
atcgaactttgtccagcagatgttggatataacgatcgtttggtaatacaagagattgta
aaagaaatagcatcctctaaacctatagagttgggtaatgtgcatcgtggatacaaagtg
gttgtattgcatgatatagatgaggtatccaaacaagctcaacaagctttaagaagaact
atggaaaaatatacaagctgttgtagaatcataatgagtgcagaatcagtaacgagagtt
atggaacctattcgtagtcgatgtttaggtattcgcattccttgtcctaaaaaggaagaa
atagaacaagtgttacaaaagatagccaaaaaggaaggacttgtattacctgattgttat
gcaaaccaattggtgactcaatcaaaaggtaatttgcgcaaagctattttattattacaa
gtaggtagagccatagcctatcccttttcacaacaacaacaaaagaagaatgaagaagaa
gaagaaagttggatatcctctcaagaaacaggttgggattgggaacgattatgttatgat
attgccaatattgtgataagagaacaaaatcctaaacaattatgtaatattagaaacaaa
ctttatgaattattttgtcatgctataccaggtgatatgatatttagaaaaataacttta
catttgttaagaatgatggatgaggaagttgcaccgcaagtttgtcattgggctgctcat
tatgaatatggaatgaaacgaggatccaaagaaatatttcatttagaagcctttttagcc
aaagtgatgtatatctattattctcatattcatactcaatattctatggcatggatggat
gattaa

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