Galdieria sulphuraria: Gasu_42450
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Entry
Gasu_42450 CDS
T02926
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl04120
Ubiquitin mediated proteolysis
gsl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Gasu_42450
04120 Ubiquitin mediated proteolysis
Gasu_42450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsl04121
]
Gasu_42450
Enzymes [BR:
gsl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Gasu_42450
Ubiquitin system [BR:
gsl04121
]
Ubiquitin ligases (E3)
U-box type E3
Gasu_42450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
6PGD_like
Motif
Other DBs
NCBI-GeneID:
17087097
NCBI-ProteinID:
XP_005704763
UniProt:
M2XX87
LinkDB
All DBs
Position
Unknown
AA seq
1129 aa
AA seq
DB search
MNWLKSRSSSSASSTHGEESQENKETQSQATPSEEEVRRKRLARFEVLNKGTSRSTVEPK
EQQTTASKKESFSKEQADSHIQSSSTSSMHRNQTSLASSNDKNFVAAVRSSSTAVASTQG
SKQSLEQLQEQIICRILRITLNEQTSSEELIFMKDLKEEWLTEKSSSEVLVTKDRADRII
FERLLQTGSGLDPLRYLLESYQRAADQESLLSISFSAEVKQPLLDTVTFVKKLIVSYLGL
LLSNSELFYTDSPMYRSAHFMEALVEDRIPAGLLKDIVTRFEEEDDNTLAEIFYPIMELL
CSKAMKTSLLKGNFAAALRALGGLLSFKSLAILFTRHRNFNLSEERISQPSVTGRSMEME
TLLGPFFRLTALKDDDEIANTLFSNPRKRTRQDVDQSMSSLRASLKVLRHGLHEILLSLL
KASPESRESVLKWFATFLHFDKERVKLQADYKKLATDGFAMNVLSVLLLLSQPFADPRSP
KLDNIDPTFCVSKHRIDYSGETRLAVDSEDLARWVDPKNPNAQVSFQNMKRQQAMELANS
GTSTFSDQKTDSIQVKDQYHFITECFFLALRSCQLVFGGTIQMYQEHILRGMQHLYSLQR
DMESSQMSASSRGGPLASIMEARLNEVNRQLDLLIVQKLSYDVYLQDEELLSLLLQFCAT
VASWLLRIAFGNQIRSSQDLKLPLPTPPPTLLCTLPEHTVEVVADALLFCARFCPSTLDS
VSFIHHEMLGFLCAIVSSPLHVRNPYLRSKFVEFLWAILGDPPSPQSPQEEWISRSTAWT
ASFESNPVCQKYLPGALVRLYVEVEHTGSHSQFYDKFSIRYHITCIFYYMWHLSTYRTSI
RYEAENESVFVKFVNMLLNDATYLLDEALGDLTEIHSLQERLDENGSSSDSTERQEQQSR
LSQLERQVKSYNLLSHSSVNMLHFLTEDDRVRKVFLKPEMVTRLAEMLNYFLLQLCGPKC
QSLVVRNREQYAWEPRVLLTQIVGIYLHFREEEDFAKSVAKDGRSYSQELFERALDIVHR
RRLLSDEECHELQLMMKRFQEFEKLESEDEDLVRNAPEEFLDPIMATIMREPVLLPTSRT
IVDLSTISRHLLSDPSDPFNREFLSMEMLQPQEELKRRIEDYIASKQKK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgaattggctgaagagtcggtcttcttcctccgcttcctccactcatggagaggagtca
caagagaacaaagaaacacagagtcaagccaccccaagtgaagaagaagttaggagaaaa
cgacttgcaagatttgaagtacttaacaaaggaacctcgcgttccactgtggaacctaaa
gagcaacaaaccactgcaagcaaaaaagaatccttttccaaggaacaagcagacagccat
attcagtcttcaagtacaagttcaatgcatagaaaccaaacttctctggccagttctaat
gataaaaactttgtagctgcagttcgttcttcttccactgctgtagcttccacccaaggc
agcaaacagagtttagaacaattacaggaacagattatatgcagaattcttagaataacg
ttgaatgaacaaacgagttcagaagagctgatttttatgaaggatttgaaagaggaatgg
cttacagaaaaaagtagttcggaagtgctggttactaaagacagagcagacagaataata
tttgaaagactattacaaacggggtctggtttagaccctcttcgttacttgttggaatca
tatcagagagctgccgaccaggaatccctcttatccatatcctttagtgcagaagtgaag
cagcctttattagatactgttacgtttgtaaagaaattgatagtttcttatttaggattg
ttattgagtaattcggaattgttctatacggattcacccatgtatcgttctgcgcacttt
atggaagccttagtggaagatagaatacctgcaggtttactaaaagatatagtgacaaga
tttgaagaggaagatgataacactctagctgaaatattttatccaattatggaactttta
tgttctaaagcaatgaaaacatctctgctcaagggaaactttgcagcagcattgagagct
ttgggaggcttactttctttcaagtcacttgccattttgttcactcgtcatcgtaacttt
aacttgagtgaagaaagaatatctcagccctctgtaacgggtagaagtatggaaatggaa
accttgctgggtcccttcttccgcctaacagcgttgaaagatgatgacgaaatagccaat
actctctttagcaatccacggaaaaggactcgacaagatgtggatcagtctatgtcttct
ctaagagcttctctgaaagttttaagacatggcctacatgagattctgttgtccctttta
aaggctagtcccgaatctcgcgaatctgtcttgaaatggtttgccacttttttacatttc
gataaggagcgtgtcaagctacaagcggattataagaaacttgcaaccgatgggtttgcg
atgaatgttttatctgttctacttttgctgagtcaaccttttgctgatcctcgttctcct
aaattggataatatagaccctactttttgtgtttccaaacatcgaatcgattattctgga
gaaacgaggttggctgtggatagtgaagatcttgctagatgggtagatccaaagaatccc
aatgcgcaagttagttttcagaatatgaagagacagcaagctatggaacttgccaatagt
ggaacaagcaccttttcagatcagaagacggactctatacaagtgaaggaccaatatcat
ttcattacggaatgtttcttcctcgccttacgttcttgtcagttggtatttggtggaacc
attcaaatgtatcaagaacatattttaagaggtatgcaacatttatattcgttacagaga
gatatggaatccagtcaaatgagtgcaagcagtagaggaggacctttagcttccattatg
gaagcaagactgaacgaagttaatagacagttggacttattgatcgttcaaaagctttcg
tatgatgtatatttacaagatgaggagttgttatcgcttttgctccaattttgtgcaaca
gtagcttcatggcttttgagaattgcctttggaaatcaaataaggtcaagtcaagacttg
aaacttccattaccaactccaccacccacattgttatgtacgcttccagaacatactgta
gaagtagttgccgatgcgcttttattttgtgcccgtttttgtccatcgactttagattcc
gtctcatttattcatcatgaaatgttaggctttctttgtgctatagtttcatcacccctt
catgttagaaacccttatttgcgttccaagtttgtggaatttctttgggctattttaggt
gatccaccttctccacaaagtccacaagaagagtggatcagtcgaagtactgcgtggacg
gcatctttcgagtccaatccagtatgtcaaaaatatttgccaggagcactggttcgtttg
tatgtagaagtggaacatacgggaagtcattcgcagttctatgacaagttttctattcgt
tatcatatcacatgtatcttttactacatgtggcacttatcaacatatagaacttccatt
cgttatgaagcagagaatgagtcagtatttgtgaagtttgtcaatatgttattgaatgat
gcaacttatttattggacgaagctttgggtgacttgacagagattcattcattacaagaa
cgcttggatgagaatggttcgtcaagtgattctacagaacgacaagaacagcagtcccga
ttgtcgcaattggaacggcaagtaaagtcgtataatttgttgtcacattctagtgtgaat
atgttgcattttttaaccgaagacgatagagttcgcaaagttttcttgaagccggaaatg
gtcactcgattagctgaaatgctcaattatttcttattgcagctttgtggcccaaaatgt
cagtctttggtggtacgtaatagggaacaatatgcttgggaacctcgcgtattgttaact
caaattgttggaatctatttacatttccgagaagaagaagattttgcaaagtctgtggcc
aaagatggtcgaagttatagtcaagaattatttgaaagagcgttagacattgtccaccgt
cgtcgattactttcagatgaagaatgtcacgagttgcagctcatgatgaaacgctttcag
gagtttgaaaagctggagtctgaagatgaagatcttgttcgaaatgctccggaagaattc
cttgatcctatcatggccaccattatgagagagcctgtgttgttaccgacaagccgaact
attgttgatctttccactatttcgcgtcatttattgagtgaccctagtgatccatttaat
cgggagtttcttagtatggaaatgttacaacctcaagaagagttgaaacgaaggattgaa
gattatattgcatctaaacagaagaaataa
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integrated database retrieval system
