Galdieria sulphuraria: Gasu_43980
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Entry
Gasu_43980 CDS
T02926
Name
(RefSeq) rRNA biogenesis protein rrp5
KO
K14792
rRNA biogenesis protein RRP5
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsl03009
]
Gasu_43980
Ribosome biogenesis [BR:
gsl03009
]
Eukaryotic type
90S particles
Other 90S particles
Gasu_43980
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
Suf
Spt6_S1
OB_RRP5
OB_RRP5_4th
RPN7
Motif
Other DBs
NCBI-GeneID:
17086927
NCBI-ProteinID:
XP_005704580
UniProt:
M2WVP9
LinkDB
All DBs
Position
Unknown
AA seq
1832 aa
AA seq
DB search
MEEPLPRGKSPKTPTLSSFEKIDAETKKGRTHSSIQKRQSNSFFDQWLKGRKKRRLHHPF
STDDNDSGDEFDENIVTFQEPFVLNISNAQGAGLENAAMLGAVQSVNVRTGRIYLISWNH
MMVVCDELSELLEPNVLKKEWQIEEEQEESHIQDNDLVVKPGMILPFSVLSVTKQGEHRK
IQVSVLPKNVNRHIDPCFLTKGCLVYGMIYEREEYGYRVTFGLESIQYDGFLPLEETESQ
ILKSGSLIXQLVCDSKISYQSKWPFGCVFPGLRMEGQVLQKKWKGSWTHIKLASNMTGFV
YSMETIRESFLDLRVIFVDVGKRVIYLSSVESLVGFLEPAKLPNAWKLGNILKNVIVEGH
LSSPKGILLRHSESNTILFAPNSQLADSDISADAALSSLPSLQSIVCCRIVAFSPLDGTI
IVSMKPSILSKTIVSFDELHPGMPVQCKIESVRENGCLCIVEDKIRAWIPQMHFGDTVGA
RLKNKFVAGKKVKGCVLSIFQDSHRCTITTKKKFIDNQYPVIASIQDAKSNIGSAAYCCV
YQVSSSRGLQVEFFQGVKGFLPVSYMGLEKLPSLEWLSENYPVGKTLKVWILSVHEESHR
IIVSLSRDVIMNDDSSAIVTYGAIVGIEYGNLIVEVCLLDSRKRALLPKEHLSDFAYLSE
RIYSLLVSYFESNSSSLPLEQVVILRSRISSNDCRALVSLKRSLIQFALTYPSLSSDRIC
SEWKANQMLPGFVEKETLHKYLIGFIGNWKVWIDKNEWSLNGKLMLRTPRKHETVWCRLH
VESRERKVVCLWTQLNNFTPQEWDKKFSFYPTRYFDDVEQWKSMLLQWRVINEATVTRQS
LFKQGEIVSAQLVSKRPHGYVFSLSNNVVKEEQVTGVSLSEVEQMSSQATVRVLEYDSFS
GFFLVCPVEDCNANSFSSGTETSLTPITCNSRLRGIVLLIKEEYLIMRIPQLNNCLVYLT
SWDPRVRANLSVIYSVDSVIEGTVYYCSERLTMLVAMDANDEKKRMIENVQVGDHVIGRI
VRISTVHLHLFIPRYSVYGRIHCSQIMSEPGKDTLISPLEHFEIGQQVEAKIIAKDHSKK
YQILDLTLNKNDVVTMEKNLVDWSNLSCRQCLTGFVHKIMTDKVLISFSSKVIGVMKRWG
FTQNEQLLSSKQIFSSLRTGQPLHCTIIRLNQSRKLLEVALSELVKPVHVGDSVVAHVGQ
VLYGAEFCLELPKWVEWSLSTCRGVLSFTDIDDNFDRATAKISHIKSRKWIKGIIIECSS
VKEKPIAIVSLRNSDAHPTQSTPKDIRWKNLMDLKAGQLVRGFIRHHSLKGCFVQLSSSI
IGRVMLRNLSDGFVQNVEETFPLGQLVTAKVIDIQNGQVELSLRESDLSDRQTIYSVLQK
GLRLQGTVKNIQPFGIFVSLGLGVTGLCHLSTLEKQSQYRIGEVIWVQVDNVDREKGRIN
LHPLDPIKENGRIGTLRQLVGIDSTSQNSSLQHSYIDSVSVDANRDVVESSDESEGNGSD
CEVLQVSESFQLQDEILLENDDSQNRANKNNVAKMVVESTEQQQDDERLERYSDEEIELE
RSLKEPQNEEDFERHVLASPDDSSIWIRYMAYFISMGQIQKAKETARRALEKISVRNQDE
KLNIWIAYLNLEAQYGDESHLASILEEACSRTNAEKLLLNFAKSMQKTRKEKSEEIYLRA
CRQFKHSPEVWMQVGTFYYEKKKNISEGRKILERALLSLPKQDHIQVITKFTVLEYKFGS
IERARTIFENMISSFPKRLDIWNVYLDMEWKQVDTEEDKERLRLLFERACSLSLSSKKMK
FLFKKYLEFEKTIGGNPERVKTLAREYVEKQL
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atggaggagccactgccaagaggaaagtcacccaagacaccaactttgagtagctttgag
aaaatagatgcagaaactaaaaaagggagaacacatagttccatacagaagagacagtcg
aattctttctttgaccagtggttgaagggaagaaagaaaagacgtttacaccatcccttt
tccacagacgataatgactctggcgatgaatttgatgagaatattgttacttttcaagaa
ccctttgttttaaatatctcgaacgctcagggtgctggattggaaaatgcggccatgtta
ggtgctgttcaaagtgttaatgtacgtactggtcgtatctatcttatctcgtggaatcat
atgatggttgtctgtgatgagttatcagagttacttgaaccgaatgtattgaaaaaagag
tggcaaattgaagaggaacaggaagagagtcacattcaagataacgaccttgtggttaaa
cctggcatgatattaccattttctgtattgtccgttaccaaacaaggagagcatcgtaaa
atccaagtatccgtacttcccaaaaacgtgaaccgacatatcgatccctgttttttgaca
aagggttgtttggtctatggaatgatctacgaaagggaagaatatggttatcgtgttact
tttggattggaatctatccaatatgatggctttcttcctttggaagagacggaatctcaa
attttgaagtcaggaagcttgattngacaacttgtgtgtgattcgaagatatcgtatcaa
agcaagtggccgtttggttgtgtatttccaggtcttagaatggaaggacaagtattacaa
aaaaaatggaagggaagttggactcatatcaaactagcttcgaatatgacaggttttgta
tattccatggagacaataagggaatcttttcttgacttgagagtgatctttgtggatgtt
ggaaaaagagtgatatatttatcatctgttgaaagtttagtcggatttcttgaacctgca
aaactacccaatgcttggaaacttggaaatattctaaagaacgttatcgttgaaggtcat
ctttcaagtcctaaaggtatactgttgagacacagtgaaagtaatacaattttatttgct
ccaaatagtcagttggcagactccgatatctctgcagatgcagctttatcttcattacct
tctttacagtcgatagtctgttgtagaattgttgcattttcacctttggatggtactatt
attgtaagtatgaaacctagcatcttatcaaagaccatcgtcagctttgatgaacttcat
cctggaatgccagtacaatgcaaaatagaaagtgtacgagagaatggttgtttatgtatt
gtagaagataagattcgtgcatggatacctcagatgcattttggagatactgttggtgct
cggttaaagaacaaatttgttgctggaaagaaagtgaagggttgtgtgttgagtatattt
caagatagtcatcgatgcacaataaccacaaagaagaagtttatagataatcaatatcct
gttattgcttcgatacaagatgctaaaagtaatatcggttcagcagcttattgttgcgtt
tatcaagtgagttcttcacgtggacttcaagtagagttttttcaaggagtgaaagggttt
ttgccagtctcttatatgggtttggaaaagttgcccagtttagaatggctatcagagaat
tatcccgtcggaaagacattgaaagtttggattctgtcggtacatgaagagtctcatcga
atcattgtgagtctttcaagggatgtcataatgaatgatgactctagtgccatcgttact
tatggtgcaattgtgggtatagaatatggaaatcttatcgtagaagtatgtcttcttgat
tccaggaagagagctcttcttccaaaggaacatttatcagattttgcctatttgtcagaa
agaatttattctcttcttgtttcgtattttgaaagtaactcttcaagtctacctttggaa
caggttgttattttgaggtcacgtatttcttccaacgattgtcgtgctttggtatcttta
aaaagatcacttattcagtttgctttgacttatccttccttgtcgagtgaccgtatttgt
agtgaatggaaagccaatcagatgttgccaggttttgtggaaaaggaaactttacacaaa
tacttgatagggtttattggtaattggaaagtgtggattgataagaatgaatggagccta
aatggaaaactaatgttgagaactccacgaaagcatgagacagtatggtgtcgtcttcat
gttgagagtagggaaagaaaggtggtgtgtctctggacgcaattgaataactttacacct
caagagtgggacaaaaagttctcattttatccaactcgttatttcgatgatgtagaacaa
tggaagagtatgctgttacagtggagagtcatcaatgaagctacggtaactaggcaaagt
ttattcaaacaaggagagatagtttcagctcagttggtttctaagcgtccacatggatat
gtattttcattgagcaacaatgttgtaaaggaagaacaagtaactggtgtatctctcagt
gaagtggaacaaatgtcgagccaagcaactgttcgtgttcttgaatatgatagtttctct
ggtttttttctcgtttgtcctgtagaagactgtaacgcaaattctttttcttcaggaacg
gaaacatcattaacaccaataacttgtaacagtaggttacgaggtattgttttgttaatt
aaggaagaatacttaattatgagaattcctcagttgaataattgtctcgtttatctcact
tcttgggacccaagagttcgtgcgaacttgtccgtaatatattctgtagactcagtaatt
gaaggaacagtgtattattgttctgaacgattgacaatgttagtagccatggatgcaaat
gacgagaagaaaagaatgattgagaacgtacaggttggagaccatgttattggaaggatc
gtccggatatctactgttcatcttcatttattcattccccgatattctgtttacggaaga
attcattgttcacagatcatgtctgaaccaggaaaggacactttgatatcacctttggaa
catttcgaaataggacaacaagtagaagcaaaaattatagcaaaggatcattcaaagaaa
tatcagatattggacttgactttaaataagaatgatgtagtaactatggaaaagaacttg
gttgattggtctaatttatcttgtcgtcaatgcttaacaggcttcgtacacaaaataatg
accgacaaagtgctaatttccttctcatcgaaagtgattggtgtgatgaaacgttggggc
tttacacaaaatgagcaattattgtcttccaaacaaatatttagttcgctacgtacagga
caacctcttcattgtactatcattcgattgaatcaatctagaaaactgttggaagtggca
ttgagtgaattagtgaagccagttcatgtcggagattctgtagttgcccatgtaggacaa
gttttatatggagctgaattttgtttagagttgcccaaatgggtagagtggagtttatcc
acttgtcgaggcgttctctcctttacagatattgacgataattttgatcgagcaactgca
aagatttctcatatcaaatccagaaaatggatcaaaggcatcattatagaatgcagttct
gtgaaggagaaaccaattgcgatagtatctctacgaaattctgatgcacatccaacacaa
agcaccccaaaagatattcgttggaagaacctgatggacttgaaagcaggtcaacttgtt
cgaggattcattcgtcaccattcattaaagggctgctttgttcaactgtcaagtagtatc
attggaagagttatgcttcgtaacttatcggatggttttgttcagaatgttgaagaaacg
tttccattaggtcaacttgtgacagctaaagtgatagatattcaaaatggacaggttgaa
ctatcattgagagaaagtgatttgtcagatagacaaacgatatattctgttcttcaaaaa
ggcttgcgtctacaaggaactgtgaagaatattcagccatttggcatctttgtatctttg
ggattgggagtcactggtctttgtcatttatctacgttagagaagcagagtcaatatcga
atcggagaagtaatatgggttcaagtggacaatgtggatagagaaaagggaagaatcaac
ttacatccgttggaccctatcaaagagaatggaagaataggaaccttgagacaacttgtt
ggaatagattccactagccagaactcttcattacaacattcttatatcgacagtgtgtcg
gttgatgctaatcgtgatgtggtggaaagtagtgacgaaagcgagggtaatggatcagat
tgcgaagtattgcaagtatctgagagctttcaactacaagatgaaattttgctcgagaat
gatgacagccagaacagagccaacaaaaataatgttgcgaagatggtagtagaaagtaca
gaacaacaacaagatgatgaaagattggaaagatattctgatgaagaaatcgaattggag
cgttcattgaaagaaccacaaaatgaagaagactttgaacgacacgttcttgcatcacct
gatgattcaagcatatggattagatacatggcttattttataagcatgggtcagatacaa
aaggcaaaggagactgctcgcagagcgctggagaagatatctgtaagaaaccaagatgag
aagctcaacatatggattgcctatcttaacttggaagcacagtatggagatgaaagtcat
ttagcctccatcttggaggaagcttgtagtcgcaccaatgcagaaaagcttcttttaaat
tttgcaaaaagtatgcagaaaacacgaaaggaaaagtctgaagaaatatatcttcgagca
tgccgtcagtttaagcattctcccgaggtttggatgcaagtgggcactttttattatgag
aagaaaaagaatatttctgagggtcggaaaattttggaacgagccttgttgtctcttcca
aaacaagatcatatacaagttattaccaaatttactgttcttgaatacaagtttggttcc
atagaacgtgcgaggaccatttttgagaatatgattagttcgtttccaaaacgtctcgat
atctggaatgtttatctcgatatggagtggaaacaagttgatacagaagaagataaagaa
cgattgagacttttgtttgaacgtgcatgttcactttcattatcttccaagaagatgaag
tttttgtttaagaaatatttagaatttgagaaaacaataggcggcaatcctgaaagagta
aagactttggcaagagaatacgttgaaaagcaactgtaa
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integrated database retrieval system