Galdieria sulphuraria: Gasu_44690
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Entry
Gasu_44690 CDS
T02926
Name
(RefSeq) coatomer (COPI) alpha subunit
KO
K05236
coatomer subunit alpha
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsl04131
]
Gasu_44690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsl04147
]
Gasu_44690
Membrane trafficking [BR:
gsl04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
Gasu_44690
Exosome [BR:
gsl04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Gasu_44690
Exosomal proteins of bladder cancer cells
Gasu_44690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
WD40
B-prop_COPA_B_2nd
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
TPR_COPA_B
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
17086839
NCBI-ProteinID:
XP_005704483
UniProt:
M2XWH3
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPARPWILASLHNGVIQLWDYRMGTLLDRFEEHEGPVRGVHFH
PSQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTVFFHHESPWIVSASDDQTIRIW
NWQNRSCIAVLTGHNHYVMSAMFHPDEDLLLSASLDQTIRVWDISGLRNRSPTSSFSSKD
NFAADIFSSNEAFVRNVIESHFRGVNWASFHPTIPLVVSGGDDRQVKLTYLENGRTREIQ
TFYGHLNNVSCVMFHPSTNLIVSNSEDRTIRVWDPIRHTCLQTYRRENDRFWILAVHPKL
NLIAAGHDSGMIVFKLDRERPPFYSVGKDLYYVKEGDVRLFDLEQGSDQSLYQLYVKPDI
MSLLYSSSEYTIGSEVRGPIYEPPPRYMHVNTFENCILLTHDRDSPKYSLYFLGKKGRST
SSETIHGFGVAVFVGRNRFATLSTGEQLQVRDLRNEITKTIACPIPGAELVFPSRPGTIL
ISNGEVVVLFDMTQRKILKELASAHVKYVVWNEHMNRVALLSKHSITLASGKLEHLAVVH
ETVRVKSAVWDDSGVLLYTTLNHLKYCLPNGDTGIVRTLDNLIYLTRARGPAVAYLDREG
NPGVLAVDPTEYAFKLLLLRKKYDEVQYLIAENRFDGQAMISYLCRKGFPEVALEFVRDD
KTRFHLALEAGLLQVAVDAAQSLDTFEIWRKLGEEALAQGNVSIAELAYQRSKDLNKLIF
LYVVTGNFDKLEKASRLAEMRQDYMAQFLISFYLGDVNMRTQLLYSSGQIMLALLYADTY
QLSEWKPKLASLSTELQSDIPLKTGLLLPAIPVYPKTSNWPLLEWTNATNGGHGLFRRNP
NALESFEEPTVTDYYEDALVAAEEQEEESWADHHSKERKQATAIDALKVFETPQTVLENS
AKSANSNIFMNQPLETHIEKKEDTWEEEGWEEEDVQIDTQEEDFGNNDYLKNEETQQQDW
LNEPISPRSDKLHSIATIAGLQKMEYKTPEEKLSIREIWSRMARCPSEYVMSGRLEDAIE
MLKTELGFISLEPLKSLFMELYITSYSCVSMLPSLDSVPIYMLDTWQRRNTPKPYYRFEQ
MEKLMTLAEQKMTVGKFSEAFNLYRQLIITLPFIIVDNDSQCSLCMEMLTTCREYIIGLM
IRTKQSEAKSKGDTLRQLELAALMTHCNMLITHQQLALQAAMKLAYATKNYLYALTFAKR
LLELAPNEEMERTAKKVMQFCERNPNNQNQLDYDIEQSNFAIDAGRLKPCIQPPTKSCVY
CGACYDESWHSMTCVVCQVAQVMEQQDENRNAYAGLISLLHKTQPISNHTKV
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaaatttgaaaccaaaagcaatcgagtaaagggtctttcttttcatcccgct
aggccttggattcttgcaagtcttcacaacggagtgattcagttatgggattacagaatg
ggaactttgttggatagatttgaagaacatgaaggtccagtaaggggtgtccattttcac
ccgtcgcaacctttatttgtcagtggaggagatgactacaaaatcaaagtgtggaattat
aaacttagacgctgtttatttaccttgttgggccatttggactacattcgaacggttttc
ttccaccacgagagtccttggattgtctctgcgtctgatgaccaaaccattcgcatttgg
aattggcagaatcgttcttgtattgcggtacttacaggtcataatcactatgttatgtct
gccatgttccatcccgacgaggatctactactctcagcttctttggatcagactatacgt
gtttgggacatatctggcttacgcaatcgttcaccaacatcttctttttcttccaaagat
aacttcgctgccgatatattttcttccaacgaggcttttgtaagaaatgttatcgaaagt
cattttcgtggcgtcaattgggcaagtttccatccaactattcctctcgttgtaagtgga
ggagatgatcgccaagtaaagttgacatatttggaaaatggacggacgagagaaatacaa
actttttatggccacctgaacaatgtatcttgtgttatgtttcatcctagtaccaatctt
attgtctctaattcagaagatcgcacaataagagtctgggatcccattcgccatacttgc
ttacaaacctatcgaagagaaaatgataggttttggattctggcagtgcatcccaaactc
aatctgattgctgcaggacatgattctggaatgattgtattcaagttggatagagagaga
cctcctttttatagcgttgggaaagatttatattatgtaaaagaaggagatgttcgactg
tttgatttggaacaaggaagtgatcagtctctatatcaattatatgtgaaacctgacatt
atgtcgttgttatattccagttcggaatatacgatcggttctgaagttcgaggtcccatt
tatgagcctccacctcgatatatgcatgtcaatactttcgaaaattgtatattattgaca
catgatagagactctcctaaatattctctatactttctaggaaaaaaaggacgttcgact
agttcagaaactattcatggctttggtgttgcagtgtttgtaggaagaaaccgatttgca
actttatctactggagaacagttgcaagttcgtgaccttcgtaatgaaataacaaaaact
attgcttgtcctattcctggagctgaacttgtatttccttctcgtcccggtactattctt
ataagtaacggagaagttgttgttctatttgatatgactcaaaggaagatattgaaagaa
cttgcttctgctcatgtgaaatatgtcgtatggaatgaacatatgaatagagtggcatta
ttgagtaagcattcaataactttggcatcaggaaagttggaacatttggcagttgttcac
gaaacagtaagagtgaaaagtgcggtgtgggatgattcgggagttttattatataccact
cttaatcatttgaagtattgtttgccaaatggagatactggaattgtgcgtactttagat
aatttgatatatttgactcgtgcaagaggaccagctgttgcttatttggatagagaggga
aatccaggagtccttgcagtggatcctaccgaatatgcattcaaattgttgttattacgc
aaaaaatatgatgaagtgcagtatttgatagcagaaaatcgttttgatggtcaagccatg
atttcttatttatgtcgcaaaggatttcctgaagtggctttggaatttgttcgagatgat
aagactcgttttcatttagcactggaagctggtttattacaagttgctgtggatgctgca
caatctttggatacttttgaaatatggcgcaaactgggtgaagaagcattggctcaagga
aatgtctccattgcggaacttgcttatcaacgttccaaagacctgaacaaattaatcttc
ttatatgtcgttactggcaattttgacaaattggaaaaggctagcaggttggcagaaatg
cgtcaagactatatggcacagtttttaatatccttttatttgggagatgtgaatatgaga
acccagttgttgtattctagtggtcagatcatgttggctttgttatatgcagatacttat
cagttatctgaatggaaaccaaaattggcttctttatccacagaattacaaagcgatata
cctttgaagacaggattgttacttcctgctattccagtatatccaaagacttctaattgg
ccattgttagaatggaccaatgcaacaaatggtggacatggtctatttagacgcaatcct
aatgctttggaaagctttgaagaacccactgtgacggactattatgaagatgcattggta
gctgctgaggaacaagaagaagaaagttgggctgatcatcattccaaggaaagaaagcaa
gctactgccatcgatgctttgaaagtctttgaaactccacaaactgtattggaaaattct
gccaagtccgcgaatagtaatatctttatgaaccaacctttagaaactcatatagagaag
aaagaggatacatgggaagaagaaggctgggaagaagaagatgttcagattgatactcaa
gaagaagactttggcaataatgattatctcaagaatgaagaaacccaacagcaagattgg
ttgaatgaaccgatatctccacgatcagataaattacattcgattgctactattgcaggc
ttacaaaagatggaatataaaactcctgaagagaaattatccattcgagagatttggtct
cgtatggcacgttgtccaagtgaatatgttatgagtggtcgtttggaagatgcgatagaa
atgttgaagacagagttgggatttatttcgttggaaccgttgaagtctttatttatggaa
ttatatatcactagttatagttgtgtatccatgttacccagtttagatagcgtacccatc
tatatgttggatacttggcagagaagaaatactcccaaaccttattatcgattcgaacaa
atggaaaagctgatgactttggcagaacagaaaatgaccgtcgggaagttttcagaagca
tttaatctttatcgtcaattgattataacacttccatttatcatagttgataacgattct
caatgcagtctttgtatggaaatgttgactacctgtagagagtatattattggtttgatg
attcgaaccaaacaatcggaagccaaatccaaaggagatactttgagacaattagaattg
gcagctttgatgacgcattgcaatatgctgattactcatcaacaattggcattacaagca
gctatgaaattggcatatgccactaagaactatctttatgctttgacttttgcgaaaagg
ttattagaattggcacccaatgaagaaatggaaaggactgccaagaaagtgatgcagttt
tgtgaacgcaatccaaacaatcagaaccaattggactatgatatagaacaaagcaacttt
gcaatcgacgcaggtagattgaagccttgtatacaacctccaactaagagttgtgtatat
tgtggtgcttgttatgatgaaagttggcattctatgacatgtgtggtttgtcaagtagct
caagtaatggagcaacaggatgaaaatcgcaatgcgtatgcaggattgatatctttattg
cacaagacacaacccatatccaaccatacaaaggtttag
DBGET
integrated database retrieval system
