Galdieria sulphuraria: Gasu_47840
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Entry
Gasu_47840 CDS
T02926
Name
(RefSeq) replication factor C subunit 2/4
KO
K10755
replication factor C subunit 2/4
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03030
DNA replication
gsl03410
Base excision repair
gsl03420
Nucleotide excision repair
gsl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Gasu_47840
03410 Base excision repair
Gasu_47840
03420 Nucleotide excision repair
Gasu_47840
03430 Mismatch repair
Gasu_47840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsl03032
]
Gasu_47840
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_47840
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_47840
DNA replication proteins [BR:
gsl03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
Gasu_47840
DNA Replication Termination Factors
ELG1-RFC complex
Gasu_47840
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
Gasu_47840
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
Gasu_47840
Check point factors
HRAD17(Rad24)-RFC complex
Gasu_47840
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_16
Viral_helicase1
RuvB_N
AAA_14
AAA_22
DNAX_ATPase_lid
nSTAND3
AAA_11
AAA_3
Mg_chelatase
AAA_5
AAA_25
RCF1-5-like_lid
AAA_7
DEAD
AAA_28
NPHP3_N
AAA_assoc_2
AAA_19
AAA_18
RNA_helicase
ABC_tran
NTPase_1
AAA_30
cpSF2-GREB1
ATPase_2
bpMoxR
AAA_24
TsaE
Motif
Other DBs
NCBI-GeneID:
17086529
NCBI-ProteinID:
XP_005704159
UniProt:
M2XW27
LinkDB
All DBs
Position
Unknown
AA seq
321 aa
AA seq
DB search
MQEPWVEKYRPKTLDEVVGNPQVVSRLQAVVHGGSLPHLLLSGPPGCGKTTMILCLARQL
LGEEWFSQAVLELNASDDRGIDVIRSKVKTFAQQKMSLPSGKHKIVILDEADSMTEGAQQ
ALRRTMEIYATTTRFALACNTPSKIIEPIQSRCAVVRLRRLEDSEIAERLEQVLRLENVE
WENSGLEAILFTADGDMRNALNNAQATVCGFGKLSQENVFKVCDQPHPNLVKQILESALE
QNVTKSNEILCSLWNKGYSALDIVQTLFRVARSHEMNEHLRLEVMKIVGKTHMKIMEGCA
SLIQLTALTSFLSEVSESTTS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagccttgggttgaaaaatatagacccaagaccttggatgaagttgttggcaat
ccccaagtggtatcgaggcttcaagctgtagtgcacgggggaagtctacctcatttgcta
ctgtcaggtcctcctggttgtgggaagacaactatgatattgtgtttagcaaggcaacta
cttggagaggaatggttctcacaagctgttctagaactaaacgcttcggacgatcgagga
attgacgtgataagatccaaagtcaaaacatttgctcaacaaaagatgagtttgcctagt
ggaaaacacaagattgtcatattggatgaagcggattcaatgacggaaggcgctcaacaa
gcacttcgaaggactatggagatatatgcgacaactacccgttttgcgttagcttgtaat
actccttcgaaaattatagagcctatacaatccagatgcgctgttgttaggttgagaaga
ctggaagatagtgaaattgccgagagactggaacaggttttgagactagaaaatgttgaa
tgggaaaactcaggtttggaggctattttgtttactgcagatggtgatatgcgcaatgca
ctcaacaatgctcaagcaactgtttgtggttttggaaagctttctcaagagaatgtattt
aaggtttgtgatcaaccgcatccgaacttggtgaaacagattttggagagtgcacttgaa
caaaatgtgaccaagtcgaatgaaatcttatgttctttatggaacaaaggctactccgct
ttggacattgtacagacacttttccgagttgctcgcagtcatgaaatgaacgaacattta
cgtcttgaagttatgaaaattgtagggaagacgcacatgaaaattatggaaggttgtgcc
agtttaatacaactgacagcattgacatcttttctctcggaagtttctgaatcgactact
agttga
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