KEGG   Galdieria sulphuraria: Gasu_47840
Entry
Gasu_47840        CDS       T02926                                 
Name
(RefSeq) replication factor C subunit 2/4
  KO
K10755  replication factor C subunit 2/4
Organism
gsl  Galdieria sulphuraria
Pathway
gsl03030  DNA replication
gsl03410  Base excision repair
gsl03420  Nucleotide excision repair
gsl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gsl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Gasu_47840
   03410 Base excision repair
    Gasu_47840
   03420 Nucleotide excision repair
    Gasu_47840
   03430 Mismatch repair
    Gasu_47840
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsl03032]
    Gasu_47840
   03036 Chromosome and associated proteins [BR:gsl03036]
    Gasu_47840
   03400 DNA repair and recombination proteins [BR:gsl03400]
    Gasu_47840
DNA replication proteins [BR:gsl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    Gasu_47840
  DNA Replication Termination Factors
   ELG1-RFC complex
    Gasu_47840
Chromosome and associated proteins [BR:gsl03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    Gasu_47840
DNA repair and recombination proteins [BR:gsl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     Gasu_47840
  Check point factors
   HRAD17(Rad24)-RFC complex
    Gasu_47840
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_16 Viral_helicase1 RuvB_N AAA_14 AAA_22 DNAX_ATPase_lid nSTAND3 AAA_11 AAA_3 Mg_chelatase AAA_5 AAA_25 RCF1-5-like_lid AAA_7 DEAD AAA_28 NPHP3_N AAA_assoc_2 AAA_19 AAA_18 RNA_helicase ABC_tran NTPase_1 AAA_30 cpSF2-GREB1 ATPase_2 bpMoxR AAA_24 TsaE
Other DBs
NCBI-GeneID: 17086529
NCBI-ProteinID: XP_005704159
UniProt: M2XW27
LinkDB
Position
Unknown
AA seq 321 aa
MQEPWVEKYRPKTLDEVVGNPQVVSRLQAVVHGGSLPHLLLSGPPGCGKTTMILCLARQL
LGEEWFSQAVLELNASDDRGIDVIRSKVKTFAQQKMSLPSGKHKIVILDEADSMTEGAQQ
ALRRTMEIYATTTRFALACNTPSKIIEPIQSRCAVVRLRRLEDSEIAERLEQVLRLENVE
WENSGLEAILFTADGDMRNALNNAQATVCGFGKLSQENVFKVCDQPHPNLVKQILESALE
QNVTKSNEILCSLWNKGYSALDIVQTLFRVARSHEMNEHLRLEVMKIVGKTHMKIMEGCA
SLIQLTALTSFLSEVSESTTS
NT seq 966 nt   +upstreamnt  +downstreamnt
atgcaggagccttgggttgaaaaatatagacccaagaccttggatgaagttgttggcaat
ccccaagtggtatcgaggcttcaagctgtagtgcacgggggaagtctacctcatttgcta
ctgtcaggtcctcctggttgtgggaagacaactatgatattgtgtttagcaaggcaacta
cttggagaggaatggttctcacaagctgttctagaactaaacgcttcggacgatcgagga
attgacgtgataagatccaaagtcaaaacatttgctcaacaaaagatgagtttgcctagt
ggaaaacacaagattgtcatattggatgaagcggattcaatgacggaaggcgctcaacaa
gcacttcgaaggactatggagatatatgcgacaactacccgttttgcgttagcttgtaat
actccttcgaaaattatagagcctatacaatccagatgcgctgttgttaggttgagaaga
ctggaagatagtgaaattgccgagagactggaacaggttttgagactagaaaatgttgaa
tgggaaaactcaggtttggaggctattttgtttactgcagatggtgatatgcgcaatgca
ctcaacaatgctcaagcaactgtttgtggttttggaaagctttctcaagagaatgtattt
aaggtttgtgatcaaccgcatccgaacttggtgaaacagattttggagagtgcacttgaa
caaaatgtgaccaagtcgaatgaaatcttatgttctttatggaacaaaggctactccgct
ttggacattgtacagacacttttccgagttgctcgcagtcatgaaatgaacgaacattta
cgtcttgaagttatgaaaattgtagggaagacgcacatgaaaattatggaaggttgtgcc
agtttaatacaactgacagcattgacatcttttctctcggaagtttctgaatcgactact
agttga

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