Galdieria sulphuraria: Gasu_48880
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Entry
Gasu_48880 CDS
T02926
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Gasu_48880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_48880
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
Gasu_48880
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
Motif
Other DBs
NCBI-GeneID:
17086486
NCBI-ProteinID:
XP_005704114
UniProt:
M2XVY5
LinkDB
All DBs
Position
Unknown
AA seq
713 aa
AA seq
DB search
MENQNEQSEWETNLEQPIKENRELQEADRNEENNDNNVRKPTFQTPKTIEAEQKIHADPW
DTDAWVTLFMEAQNQPIEVARSTYKLFLSQFPTAGRYWKLYIEHEWKQGNEEVVEDTFQK
ALLTCHHIDLWKTYTDYIRSRKSRTEATEAYEFALKHLGLDIQINHLWNDYIVFIQEWEP
RNAQEENTKRDQLRSAYQRALQTPMYNLDNFWKEYENFENSLNRTLAKGLLSEYQPLYSA
ARAEFRARKNRREGLLLNVLACPPSPKMEEQVRLWRKYIEGEKSNPHKLETEELHKRVVA
AYEQAIICLYRYPDLWLEIYFYHVQRRDLDTAKEYLYRGIQACPECAMLYFCLADLEESM
KNFSIVESLYEELLKLSPSSLVYIQYMQFLRRVKGIDASRKLFLRARKEISDYHLYIAAA
ELEYYRNKNLDAALNIFELGLKSFPQVLDFALEFIAFLWMLGDETNLQALFERLLLEYPV
EDSPVIWDKYCQFAQSFFGLEKRREIEMRRLEAIGGGEKFLLESALSYYSFRDVNGWTSS
DLLYIGDSLNSRQSIHTVSSLEPKSTKSTTKRNRTSIDSKRTESNFSSHWGGNSGSLLES
LQALMNMFPFASDIIPDVNYVLNLVVCTPDNVQGIPNIQNEKSRGEKRKNTSDWSKGMNP
NSLSPPHRMNGMSTEEEEVEENAPTYNVPSDNQRLPTRDIFRVRQAQRQAKST
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaccaaaatgaacaaagtgagtgggaaacaaacttggaacaacctataaaagag
aatagagagttacaggaagcagacagaaacgaagaaaacaatgacaacaacgtcagaaaa
ccaactttccaaaccccaaagactattgaagcagaacaaaagatacacgcagatccgtgg
gatacggatgcttgggttaccttgttcatggaagcacagaaccaacccattgaagtagca
aggtcaacgtataaactgtttttatcccagtttccaaccgctggacgttattggaagttg
tacatcgaacacgagtggaaacaaggaaatgaggaagtggtagaggacacctttcaaaag
gctttattaacttgtcaccatattgacttgtggaagacatatactgactatataaggagt
aggaaatccagaacggaagcaacggaagcgtacgagtttgctttgaagcatcttggactg
gatattcaaattaatcatttgtggaacgactatatagtttttattcaagaatgggagcct
cgaaacgcacaagaagagaacaccaaaagagaccaacttcgctctgcctatcaaagagcg
ttacaaacgccgatgtacaacttggacaacttttggaaagaatatgaaaactttgaaaac
tctttaaataggacacttgccaaaggcttattatcggaatatcaaccattgtattctgct
gcaagagcagagtttcgtgctcgtaagaaccgtagagaaggactcttgttgaatgttttg
gcttgtccaccttctcctaagatggaagaacaagtgcgtttatggagaaagtatattgaa
ggagaaaagtccaatccccacaagttggaaactgaagaattgcataaacgtgttgttgcc
gcatatgagcaggcaatcatatgtttgtatagatatcccgatttatggctggaaatttat
ttttatcacgtccaaagaagagatttggacactgcgaaagaatatttatatcgaggaatt
caagcttgtccagaatgtgccatgttatacttttgtttagctgatttggaggaatctatg
aaaaatttttccattgttgagtcactttatgaggaacttttgaaattatcgccatcttct
ttggtatatattcagtatatgcaatttttgagacgagtgaaaggaattgatgccagtcgc
aagttgtttctaagagctagaaaggaaatttctgactatcatttgtacattgctgcagca
gaattagaatattatcgaaataagaatttggatgctgctttaaatatatttgagttggga
ctcaagtcttttcctcaagtcttggattttgcacttgagtttattgcatttctatggatg
ttgggggatgaaaccaatctccaagcgttgtttgagaggttattattggaatatcctgtt
gaagacagtccagtcatttgggataagtattgtcaatttgctcaaagtttctttggttta
gagaagcgaagagaaattgaaatgagacgtttagaagccatcggaggaggtgaaaaattc
ttattggaatctgctttatcctactattctttccgcgacgtgaatggttggacatcgtct
gatctgctctatattggagatagtttaaacagtcgacaatccattcatactgtctcatct
ctagaaccgaagtctactaaaagtacaaccaaacgtaatcggacgagtatagattcgaaa
agaaccgaatccaatttttcttctcattggggaggcaattctggtagtctgttggagagt
ttacaagctttgatgaatatgtttccttttgcttcggatattattcccgatgtaaattat
gtattgaatcttgtagtatgcacaccagacaatgtacaaggcattcccaatattcagaac
gaaaagtcacgaggagagaaaagaaagaatacaagtgattggagcaaaggaatgaatccc
aattcgttatcacctccacatcggatgaatggaatgtccactgaggaagaagaagtggaa
gagaatgccccaacttacaacgttccttcagataatcaaaggttacctaccagagatata
tttcgtgttcgacaagcacagagacaagcaaagtccacttga
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