Galdieria sulphuraria: Gasu_49490
Help
Entry
Gasu_49490 CDS
T02926
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
Gasu_49490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsl03019
]
Gasu_49490
03041 Spliceosome [BR:
gsl03041
]
Gasu_49490
Messenger RNA biogenesis [BR:
gsl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
Gasu_49490
Spliceosome [BR:
gsl03041
]
Complex B
Other components
Prp19-related factors
Gasu_49490
Complex C
Gasu_49490
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
TPR_14
HAT_PRP39_N
HAT_PRP39_C
TPR_8
TPR_2
ARM_TT21
TPR_12
RPN7
TPR_MalT
NatA_aux_su
TPR_16
TPR_10
TPR_1
Motif
Other DBs
NCBI-GeneID:
17086403
NCBI-ProteinID:
XP_005704020
UniProt:
M2WUA8
LinkDB
All DBs
Position
Unknown
AA seq
905 aa
AA seq
DB search
MTSTFEYLNNVPTEYLYYEEEVLRDPFTLKKWLFYLDALKYAVPKVKFSVYERAVAALPR
SYKLWTMYLRERQEYTKKRHPSSKSYLIVNRIYERSLVYLNKMPVLWSMFCRFLLEQCRW
TYTRHALDRALRSLPVTQHNRIWPIYLEFARKCGVAESAARVFHRYMKLEPFVVEEFAEY
LKEAGRYDEAASIMSKLLCDPQFAPRKKGRTKHDLWLELCELLVNHGSEVYHVDVEGVLR
GGLKSYEDEAGTLWCYLADYYTQKGLFEKARDIYEEALEKVKTVRDFSVVFDAYAKFEES
ILTHSLENASEETSTVVDDEYLDLTIYRLEDLMNRRPLLLSSVILRQNPHNVREWHKRAK
LFVENDPVSVLKTYSEAIQSIDPAQATNGRLYTIWVAFARFYEIHGDLDSAREVLEEATD
FEFRHTDDLVNIYCEYVELELRHNNLDKALLIGQRAVKEPKQEKNFKANRAKAAIAAGAG
NIAIEGNWNVWRERAKDRAWRSPKLWGLLADLEESLGSFERCCAVYERMIDLKICTAQNV
LNYAAILEENRFFEDAFRIYERGVALFCQSPEEDEGVDMMPSKNQMNNNMMSKRKQRTFN
PAVLALWLLYIDKFLQRYGGEKMERTRDLFEAAIRHIPSTFLKTMFMFYANTEEVYGSAR
RVMSILERAVEQVPVEDRYSLFQFYIAKSAKLYGLARLRVAYEQAIASVQGAPVIQLCLE
YADLETRLGEYDRARAVYSHGAQLADPREYADYWKIWNDFEVAHGTEDSFRDMLRVKKSV
ETLYSRVHYAAPMAQTAVQPDAMELIEQETIKETQESIRETANIQENPDEIELSQDSDRE
EEQEGNKKGEKHDIEAIEQQPLPETLFQPLAKTENRDQNNNTVGALERFKRKKRKQDEPS
HDSLE
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccacttttgagtatttaaataacgttcctactgaatatctttactatgaagaa
gaagttttacgagatccttttacgttgaaaaagtggttgttttatttggatgccttgaaa
tatgctgttcccaaagttaagttttcggtatacgaacgggcagtcgccgcactaccaagg
agttataaactttggactatgtaccttcgagaacgccaagaatacaccaaaaaacgtcac
cccagtagcaagtcatatctgatagtgaatagaatttatgaacggagtcttgtttatttg
aacaaaatgcctgttctttggtccatgttttgtcgctttttactggagcagtgtagatgg
acatatactcgtcacgcactggaccgtgctttgcgatccctcccggttactcaacataac
cgaatatggcccatttacttagaatttgcccgcaagtgtggagtagcggaatcagctgct
agagtgtttcatcgttatatgaagttggagccttttgttgttgaagagtttgcagaatat
ttgaaggaagctggacgttatgatgaggcagcttccataatgagtaaacttttatgcgac
ccccaatttgcgccaaggaaaaaaggtagaacaaaacatgatttgtggttagaattgtgc
gaattgttggtgaaccatggctcggaagtttaccatgtggacgttgaaggtgttcttcga
ggtggtttgaagagttatgaagatgaggcgggaactctctggtgctatttggctgattat
tatacacaaaaaggactctttgagaaagcaagagatatatacgaggaagccttggaaaaa
gtaaaaacagtgcgcgatttttccgtagttttcgatgcttatgcaaagtttgaggaaagt
attttaacacattcgttggaaaatgcaagtgaagaaacatcgacagtagttgacgatgaa
tatttagatttgacaatatatcgactggaagacttgatgaatagacggccattgttgttg
tcgtcggtgatattgcgacagaatcctcacaatgttcgagaatggcataagagagcaaaa
ttatttgtagaaaatgatcctgtttccgttttgaaaacttattcagaagccattcaatcg
atagatcctgctcaagcaaccaatggccgattgtatactatttgggttgcatttgctcgg
ttttatgaaatacatggagacttggactctgcacgagaagtgcttgaggaggctacagat
tttgagtttcgtcatacggatgatttggtaaacatttattgtgaatatgtggaattggaa
ttacgccataataatctggacaaggcattgttgattggtcaacgcgctgtgaaggaacca
aaacaagagaagaatttcaaagcgaatcgtgcgaaagctgccattgctgctggtgccggt
aacattgcaattgaagggaattggaacgtttggagagaacgagcgaaagatcgtgcttgg
cgttctccaaagttgtggggtcttttagcggatttggaagagtcactcggttcatttgaa
cgatgttgtgcggtatatgaaagaatgattgatttgaagatatgtactgctcagaatgtg
ctaaactatgcagctattttagaagaaaatcgattttttgaagacgcttttcgaatatat
gaaagaggagttgcactattttgtcagtcaccggaagaagatgaaggtgtggatatgatg
ccttccaaaaatcagatgaataacaatatgatgtcgaaacgcaaacaacgcactttcaat
ccagctgtattagcactttggttactttatattgacaagtttttgcaacgctatggcggt
gagaaaatggaaagaacgagagatttgtttgaagcagccattcgtcatattccctctacg
tttctgaagaccatgtttatgttttatgcgaatacggaagaggtatatggctctgctaga
agagttatgtcgatattagaaagagcagttgagcaagttcctgtggaagatcgatattct
ttgttccaattttatattgccaaatctgccaaattatacggactagcgagattgcgtgtt
gcctatgaacaagccattgcaagtgttcaaggtgctccagtgattcaactttgtttggaa
tatgcagacttggaaacacgtttgggcgaatatgacagagctagagcagtttattcacat
ggtgctcaacttgcagatcctcgtgaatacgctgattattggaaaatatggaatgatttt
gaagttgcacatggaacagaagactctttccgtgatatgcttcgagtaaagaagtcggtg
gaaactctatattcaagggttcattatgctgcacctatggctcagaccgcagttcaaccc
gatgcaatggaattgattgaacaggaaactataaaagaaacacaagaatccattcgagag
acagcaaatattcaagaaaatcccgatgaaatagaattgtcacaggacagtgacagagaa
gaagaacaagaaggaaacaagaaaggagagaaacatgatatcgaagctattgaacaacag
cctttacctgaaaccctattccaacctttggccaagaccgaaaatagagaccagaataat
aatactgttggtgctttggaacgtttcaaacgcaagaaacgaaaacaagatgaaccatcg
catgattcattggaataa
DBGET
integrated database retrieval system
