Galdieria sulphuraria: Gasu_49590
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Entry
Gasu_49590 CDS
T02926
Name
(RefSeq) DNA-directed RNA polymerase subunit
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03020
RNA polymerase
gsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Gasu_49590
09124 Replication and repair
03420 Nucleotide excision repair
Gasu_49590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_49590
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_49590
Enzymes [BR:
gsl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Gasu_49590
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
Gasu_49590
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
Gasu_49590
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-GeneID:
17086413
NCBI-ProteinID:
XP_005704030
UniProt:
M2WUB3
LinkDB
All DBs
Position
Unknown
AA seq
1184 aa
AA seq
DB search
MDDEEITQEDAWTVISSYFEEKGLVRQQLDSFDEFVTNTMQEIVDSQPDLVLTAEPQYLP
GQRSEDLDKRYVVSFGQLSLSKPTFTEDTGETRPLYPNQARLRNLTYSSALYCDVTVTEV
NLESGKEETSQHPPIRVFLGRIPIMLKSQFCHLYNLEPWDLAELGECPYDQGGYFVINGS
EKVIIAQERMTSNHVFVFKRSQPSKYSYVAECRSAPDSGNRPPSLLQVKLLRGGAKGISG
QYIRVSMPYIKQDIPVIIVFRALGFENDREIMSHICYNFQDEELMTFLMPSIEEAAVIQD
HLVALDYIGKRGNTIAVTKDKRIQYAREVLQKEFLPHIGIGEGCELKKGYFLGYVINRLL
STALGRREVDDRDHYGNKRLDLAGPLLGEMFRHHLRRVLKETRSILQRNLDTGKGLNLQG
AVKSRTITNGLKNALATGNWIRGRTGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPR
QLHNTHWGMICPAETPEGQACGLTKNLALMAYISVGTPSAPVIEFLEEWSMENLLEISPS
VVPLATKVFVNGAWVGIHREPEDLVRTLKELRRQGTIKEEVSIVMDHQFKELRIYTDPGR
VCRPLFIVNPPPPPISFEDANEDTNVFGQRPPQTLAIKKSHIDMLKRTDGDRCSFSFLVE
NGLIEYVDVNEEETTMIAMNIKDLIETDSEVVYTHCEIHPSMILGVCGSIIPFPDHNQSP
RNTYQAAMGKQAMGIYATNYQLRMDTMAHVLYYPQKPLVTTRAMEHLQFRSLPAGINAIV
AIACYSGFNQEDSVILSQSAVDRGLFRSLFFRTFRDEERRRLGGAQETFEVPNPKECIGT
KRGAYDKLEEDGLVAEGTRVSGDDILVGKTCPLGRMAANGEEDETWKAYSQTLGGKTKKD
ASTSMRSTETGVVDKVMLAANEAGARFVKVRIRSVRVPQVGDKFSSRHGQKGTVGITYGQ
EDLPFNVDGIVPDIIINPHAIPSRMTIGQLIECLQGKVSAIAGREGDATPFTWVTVDEIS
QQLKTLGYQSRGWELMYNGFTGRPLEAHIFIGPTYYQRLKHMVDDKIHSRARGPVQILTR
QPVEGRAREGGLRFGEMERDCMISHGAAFFLKERLMDESDAYRIHVCNLCGLIAIADLKR
NTFECRSCRNKTEISQVFIPYACKLLFQELMAMGIAPRIVTADE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagagatcactcaggaagatgcttggactgtaatttcttcatactttgaa
gaaaagggtctcgtgagacaacaactagactcttttgatgagtttgttactaataccatg
caagaaattgtggactctcaaccagacctcgtgttaactgctgagccgcaatatttacct
ggtcaacgttcggaagacttggataaacgatatgtggtatcttttggacagttgagtttg
tcaaaaccaacttttacagaagacacaggtgaaacgagacctttatatcctaatcaagca
agacttcgaaaccttacctatagttccgctttatattgtgacgttactgtaactgaagtc
aatttagaaagtggcaaagaagaaacttcacaacatccccctattcgagttttcttggga
agaattcctattatgctcaagtcacagttttgtcacttgtataatttagagccttgggac
ttggcagaattgggagagtgtccatatgatcaaggaggttattttgtgattaatggaagc
gaaaaagtgattattgcacaggaaaggatgacttctaaccatgtttttgtatttaagcgc
tcgcaaccttcgaaatattcttacgtagcagagtgtcgttcagctccagattctggaaat
aggccaccttctttgctccaagttaaacttcttagaggtggagcaaagggtatttctggt
caatatattcgagtatcgatgccatatatcaaacaagatattcccgttattatcgttttt
cgtgccttgggatttgagaatgatcgagaaataatgagtcatatttgttataactttcaa
gatgaagaactcatgacatttttaatgccttcgattgaggaggctgcagtaattcaggat
catttagttgctttagactatatcgggaagagaggaaatactattgctgtgactaaagac
aagaggatacaatatgctcgggaagttttacaaaaggagtttttgccacatattggaatt
ggcgaaggctgtgaattgaaaaaaggatacttcttgggttacgtaattaatcgtttgctt
tccactgcacttggcagaagagaagtagatgatagggatcattatggaaacaaacgtttg
gatctagctggacctctattaggagaaatgtttcgtcatcatttgagaagagtattgaag
gaaaccagaagtattcttcaacgcaatcttgatactggaaaaggtttaaaccttcaagga
gcagtcaagtctcgtaccataacgaatggcttaaagaatgctttggctactggtaattgg
atacgtggaagaacgggtgtctctcaagttttaaatcggctcacttatgcttcaactctt
tcacatttacgtagactaaactcacccattggtcgtgagggtaaacttgcgaaaccacga
caattacataatactcattggggaatgatttgtccagctgaaacacccgaaggtcaagca
tgtggtttgaccaaaaatttggcattgatggcttatatttctgtcggtactccttctgcg
ccagtgattgaattcttagaagaatggagtatggaaaatttgttggaaatatctccttca
gtagttccactggctacaaaggtttttgtcaatggtgcttgggttggtattcatcgtgaa
ccagaggaccttgttcgaacattgaaagaacttcgtcgacaaggaacgatcaaggaagaa
gtgagtatcgtcatggaccatcagttcaaggagcttcgaatatatacggatcctggtcgt
gtttgtcgacccttatttattgtcaatccaccaccccctcccatatcttttgaagatgct
aatgaagatactaatgtatttggtcaacgtccaccacaaactttagccattaagaagtca
catattgacatgttgaaaaggacagacggagatcgttgtagtttttctttcctagtagag
aatggtcttatagagtatgtcgatgtaaacgaagaagagacaactatgattgcgatgaat
ataaaagatttgattgaaaccgactctgaagtagtttatacacattgtgaaattcatcca
tcgatgatattaggcgtttgtggttccattattccatttcctgatcataatcaaagtccg
cggaatacttatcaagcagccatgggaaaacaagcaatgggtatttatgcaaccaattat
cagttacgaatggatacaatggcacacgtgttatattatccacaaaagccattagttact
acacgtgcaatggaacatttacagtttcgttcgcttcccgcaggtatcaatgccattgtg
gcaattgcatgttactctggatttaatcaagaagattccgttattttgagtcaaagtgct
gttgatcgaggtttatttcgttcgttgtttttccgaacgtttcgtgatgaagagcgtcga
agactaggaggtgctcaagaaacctttgaagttcccaatccaaaggaatgtattggaacc
aaacgaggtgcatatgacaagttggaagaagatggtttggtagcagaagggactcgagta
tcaggagatgatattttggtgggtaagacatgcccacttggaagaatggcagccaatgga
gaagaagatgaaacgtggaaggcgtattctcagacattaggaggcaaaaccaaaaaggat
gcatctaccagtatgcgaagtactgaaacgggtgtagtagataaagtcatgttggctgcc
aatgaagcaggcgctcgttttgttaaagtccgcattcgttcggttcgtgtaccacaagtt
ggagataaattttccagtcgtcatggccagaaaggaactgtgggtattacttatggtcaa
gaagatttaccttttaatgtggatggtattgttcctgacattattatcaatccacatgct
attccaagtcggatgacaataggtcagttgattgagtgtcttcaaggaaaagtttctgcc
attgctggaagagaaggagatgcaactccctttacttgggttactgtggatgaaatatct
caacagttgaaaacattgggttatcagagtcgtggatgggaactgatgtacaatggtttt
acaggtcgacctttggaagcacatatatttattggtcctacttattaccaacgactcaag
catatggttgacgataaaatacattcacgtgctcgtggtcctgttcaaatacttacgaga
caaccagtcgaaggaagagctagagaaggtggactccgttttggagaaatggaaagagat
tgtatgatttctcatggagcagcgttctttttgaaagagcgtttgatggatgaatcggat
gcttatcgaatccatgtttgcaatctttgcggactgatagctatcgctgatttgaagagg
aatacttttgaatgtcgcagttgtcgtaacaaaacggaaatatctcaagtattcattcct
tatgcctgtaaactgctgtttcaggaacttatggcgatgggtattgcaccaagaattgta
actgcagatgaataa
DBGET
integrated database retrieval system
