Galdieria sulphuraria: Gasu_50140
Help
Entry
Gasu_50140 CDS
T02926
Name
(RefSeq) chromatin remodeling complex / DNA-dep ATPase
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
gsl
Galdieria sulphuraria
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_50140
03036 Chromosome and associated proteins [BR:
gsl03036
]
Gasu_50140
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
Gasu_50140
RSC complex
Gasu_50140
Chromosome and associated proteins [BR:
gsl03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
Gasu_50140
SWI/SNF complex
Gasu_50140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HSA
DEAD
SnAC
HDA2-3
QLQ
PSY3
Chp1-like_SPOC
Aminotran_5
DUF2254
Motif
Other DBs
NCBI-GeneID:
17086329
NCBI-ProteinID:
XP_005703938
UniProt:
M2XUV6
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MEATISQVNSYTSRNNIESQVGFVSEPNDIVEYALALLDHNGVSLTDPRVSKLLGLANQL
DDSGLHENLTSLETGEDMSGVYNVDSCSEPLLSSSQTTTTDPERMDGRQLQKLRAQIQTY
RLLRQNKPISTSLLLLSAGEFEKRNYEQAENQLSQETESADGISAVSRSKAVLSSASTAA
KLFSNHEDSSTSWEGEYEEHTSYSNLMEKRERLLENRIERRLKLLKLLPTDLPPHVRIRA
TIEEKELKLHKLQENVRKQVRKEMERLLSGPFNSSVLSTLRREAQRGDHYNMVSNVAAGT
YMNGLPSNMRRSVSRVERRHKQELEERRRARHRQYLSSLMEHVRNFRDFHNIVSNIQHRM
VREVEKYHKERAREEERRQKKAQQERLKALKENDEEAYFKLLQNTKNTRLMQLLRQTDIY
LSQIGAQVRRQKELAESEEPLKARVKERKHDSAQAAAAQALEEAENTLREGGSAADTLED
MRRRRDEYYTITHSITEEITEQPNTLVGGTLKPYQLEGLQWLISLFNNNLNGILADEMGL
GKTIQTIACLCYLMEKKNINGPFLIVVPLSTMSNWIREFDQWAPHIVKVIYRGDPTTRRQ
IQQHEMVAGTFNVLLTTYEYVIRDKSALSRVKWRYIIIDEGHRMKNAHCKLAMTLGVKYH
SRNRLLLTGTPLQNNLHELWALLNFLLPNIFSSSDNFEAWFNAPFQSSALGETAELDEEE
TMLIINRLHQVLRPFLLRRMKSDVESQLPEKTEHVINCELSAWQKVLYRQISSKGGIAIR
EGSAAATFNNLIMQMRKVCNHPFLFYYDEDIDQLPREYVIRASGKFLFLSRVLPKLRASG
HRVLIFTQMRKVLDFLQSLLEFLGIKFLRLDGTTKSDERVDLLEAFNDPDSEYFAFLLST
RAGGLGLNLQSADTVIIFDSDWNPMMDMQAQDRAHRIGQTREVKVFRLVCSGTVEEKILE
QAQKKLNMDAQVIQAGQFNNRASDLDRRRMLEEILRRQQDDSSRDQAQDDEDTNRMLARS
DEEFELFCRIDKERNKSHPIELLEDESELPQWILNPREDDNNVGYTEAKLDGRIGRWRRA
REEVMYSDNLTEREWDRIVEEGGDIDEALRKKKVELEKRRKLGKRGRVSWRDKEEDASMD
DLSDSDSKAQKKHRRLLVKTVEEEEEEEEEGETDDDGSDVSEEREDSEFRSGTNGYDNSE
YDEATDDAINGTDSEVYGRHSRPLSTSASVDDTQESFSTKDWTSDNNSSENEDDNEMFNR
VPKRLEF
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaaccatttcacaagttaactcttatacaagtcgaaataacatagaaagccaa
gttggtttcgtttcggagccaaacgacatagtagaatatgctttagccttgttggaccac
aacggagtttctttaactgacccaagagtttcaaaactgttagggttggccaaccagtta
gacgacagtgggttacatgaaaacttgactagtttggagactggagaagacatgagcggc
gtatataacgtagactcttgttcggaaccactgttgtcaagctcgcagacgaccactact
gacccggagcgtatggatggacgacaactgcagaagttgcgtgcacaaatacagacttat
agactattgcgccaaaacaaaccaatttcaacctcgcttcttttattgtctgctggtgag
tttgagaaacgaaactatgagcaagcggagaaccaactctctcaagagacggaatcagcg
gacggcatttctgcagtttcgcgttcgaaagccgtactttccagtgcaagtacagcagcc
aaactattttcaaatcatgaagattcaagtactagttgggagggagaatatgaagaacat
acgagctactcgaatttaatggaaaaacgcgaaaggcttctggagaatagaatagaacgt
aggctgaagttacttaaacttttgccaactgacctacccccacatgttcgtatcagggca
acaatagaagaaaaagagttaaaactgcacaagttacaggaaaatgtcagaaaacaggtt
cgaaaagaaatggaaagattactttcaggtcctttcaacagttcggtattaagcacatta
cgaagagaagcgcaaagaggagatcattataatatggtgagtaatgtagcagcagggaca
tatatgaacggcttgccaagtaacatgagacgatctgtttctcgtgttgaaagacgtcac
aaacaggaactggaagaaaggaggagagcgagacatcgacaatatttgtcatctttgatg
gaacatgttcgaaactttcgtgactttcataatattgtttccaatattcaacatcgaatg
gtacgtgaagtagaaaaataccataaagaaagggcaagagaagaagagagaagacagaag
aaagcacaacaggaaagattgaaagctttgaaggagaatgatgaggaagcttacttcaag
ttacttcagaataccaagaacacacgtttgatgcaattattgagacaaacggatatttat
ttgtcacaaattggtgcgcaggttcgtcgtcaaaaagaacttgcagagtcggaagaaccc
ttaaaggctcgagtgaaagaacggaaacacgattcggcccaagcagctgcagctcaggct
cttgaagaggcggagaatactttgagagaaggtggctctgcagcagatactttagaggat
atgagaagaagacgagatgaatattataccattacacattcgattacagaagaaataact
gagcaaccgaataccttagttggtggtacactcaaaccttatcaacttgaaggattgcag
tggcttatttcattgtttaataataacctgaatggtattcttgcagatgaaatgggtctg
ggaaagactattcaaacaattgcttgtttgtgttatttgatggagaagaagaacatcaac
ggtccattcttaattgttgtacctttgtcaacgatgagtaactggattcgagaatttgat
cagtgggcacctcatatcgttaaagttatctatagaggtgacccgaccactcgaagacaa
atacaacagcacgaaatggtggcgggtaccttcaatgttctgttaactacatatgaatat
gtcattcgagataagagtgcattgagcagagtcaagtggcgttatataatcatagatgaa
ggtcatcgaatgaagaatgcacattgtaaacttgcgatgacattaggcgtaaagtatcat
tcgagaaatcgtcttttgttgacagggactcctctccagaataacttgcatgaattgtgg
gcgcttctgaattttctgcttcctaatatattttcgtcttcagacaattttgaagcatgg
ttcaatgccccgtttcagtcaagtgccttgggagaaactgcagaactggatgaagaagaa
acgatgttaatcatcaatcgattgcaccaagttctaagaccatttttactgagaagaatg
aagagtgatgtggaatctcaactgccggagaagacagagcatgtgatcaattgtgaactt
tcagcttggcagaaagtcctgtatcgccagatctcttcaaagggtgggatcgcaattcga
gaaggctccgcagctgccactttcaacaacctgattatgcagatgagaaaagtttgcaac
catccttttttgttttactacgacgaagatattgatcaacttcctcgagaatatgtcatt
cgtgccagtggcaaatttctgttcttaagtagggttttacccaaattgagagcttctgga
catcgggtgctcatattcactcaaatgcgtaaagttctggactttcttcaatctctactg
gagtttcttggtatcaagtttctcaggttggatgggacaacaaagtcagacgaaagagta
gatttgttagaggcatttaatgatcctgattctgaatactttgcttttcttcttagcaca
agggctggaggtttaggacttaaccttcaaagtgccgacactgtcattatttttgattct
gattggaatcctatgatggatatgcaggctcaagatagagcacaccgtattggtcaaact
agagaagttaaagtatttcgactggtttgtagtggaactgtggaggagaagattttagag
caggctcagaagaaattgaacatggatgcgcaagtcattcaagctggtcaatttaataat
cgagcttcagacttggaccgacgacgtatgttggaagaaattctaagacgtcagcaagat
gattcttcgcgtgaccaagctcaagacgatgaagacaccaataggatgcttgctcgaagt
gatgaagagtttgaattattttgtcgcattgataaggaacgcaacaagtcccatccaatt
gaactactagaagatgaaagcgaacttcctcagtggatattgaatcctagagaagatgac
aataatgttggttatacggaagcgaaattagatggacgcattggaagatggagaagagcc
cgagaggaagtaatgtatagtgacaatttgacggaacgtgagtgggatcgcattgtggaa
gaaggtggtgatatagacgaagctctacggaagaagaaggttgaattggaaaagcgtcgc
aagttgggcaagcgtggacgtgtttcatggcgagacaaagaagaagatgcttcaatggat
gacttgagtgattcagatagtaaggcccaaaagaaacatcgtcgtttattagtcaagact
gtggaggaggaggaagaagaagaagaagaaggagaaacggatgacgatggatcggatgtt
tcagaggaacgtgaagatagcgagtttcgttcaggtacgaatggttacgacaactctgaa
tatgatgaagctacagatgatgctataaatggtacagactctgaagtctatggtcgccat
tccagacctttgagcacatcagcttcagtagatgatacacaagaaagtttctctaccaaa
gactggactagtgataataatagtagtgagaatgaagacgataatgaaatgttcaaccga
gttccgaagcgtttagagttttga
DBGET
integrated database retrieval system
