Galdieria sulphuraria: Gasu_50800
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Entry
Gasu_50800 CDS
T02926
Name
(RefSeq) transcription initiation factor TFIIH subunit H3 isoform 1
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
gsl
Galdieria sulphuraria
Pathway
gsl03022
Basal transcription factors
gsl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Gasu_50800
09124 Replication and repair
03420 Nucleotide excision repair
Gasu_50800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsl03021
]
Gasu_50800
03400 DNA repair and recombination proteins [BR:
gsl03400
]
Gasu_50800
Transcription machinery [BR:
gsl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Gasu_50800
DNA repair and recombination proteins [BR:
gsl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Gasu_50800
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
zf-C2H2_6
Hormone_1
zf-Sec23_Sec24
Motif
Other DBs
NCBI-GeneID:
17086266
NCBI-ProteinID:
XP_005703870
UniProt:
M2WTX6
LinkDB
All DBs
Position
Unknown
AA seq
328 aa
AA seq
DB search
MSSLCFWNWEMKMDLVGISVSKESQQNTVTQDSDKSNLLCVLLDLSPNLFDRLDKFVPSQ
SAKSVDLIEADALETFLLQLITFLHVFLLSNFANRLVIIVYNEYNIHVVYEDKGLNTLSD
PSNSASFLLTEERQERLTRLDSEFLKNVASFIESYPYNSCEENGTLLSASLSFALCYLHR
RILSERYEARILCLHASSDVPKQYIGVMNSIFCAQRWSILIDVCNLHEEESSLLQQAAHL
TGGIYFKPKQSEAIPLSNYLCSLYFPSRDARKYLKIPVLNSVDCSALCFESGEKIHMGYI
CSVCLATFGRKRLSCNICGAEFAENDKS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcttgtgcttttggaattgggaaatgaaaatggacttggttggtatttcagtt
tccaaagaaagtcaacaaaatactgtaacacaagatagtgataagtcaaatcttctttgt
gtcctattagacttgagtccaaatttattcgatagactggacaagtttgtacccagtcaa
agtgctaaaagtgtagacttgatcgaagcagacgcacttgaaactttcctactacagttg
atcacttttcttcacgtctttttgttatcgaactttgcaaacagattagtgataattgta
tacaatgaatacaatattcacgttgtatacgaggataaaggtttaaatactctgagcgac
ccatccaattctgccagttttttgttgacagaggaacgacaggaacgtttgacccgactt
gattcagaattcttgaaaaatgttgcaagttttattgaatcatatccttacaatagttgc
gaagagaatgggacacttctttcagcttccctttcttttgcgctttgttatcttcatcgt
agaatactatcggagagatacgaagctcgcattctttgtttacatgcgtcttcagatgta
cccaaacagtatattggagtaatgaatagtatattttgtgcgcaacgttggagcattctt
atagatgtttgtaacttgcatgaagaagaatcatctctattgcaacaagctgctcatctt
acaggaggtatatactttaaaccgaaacaatccgaagccatacctctgtcgaactattta
tgtagtttatattttccaagtcgagatgctcgaaagtatttaaaaataccggtgctgaat
agcgttgattgtagcgcgttgtgttttgaaagtggagaaaagatccatatgggttacatt
tgttccgtttgtttagcaacttttggcagaaagagactttcctgtaatatatgtggtgca
gagtttgcagaaaatgataagagttga
DBGET
integrated database retrieval system
